TABLE 1
Putative identifications of Neurospora cDNAs.
Classification was done according to Nelson and coworkers (Nelson et al. 1997).
Only those sequences with BLASTX P/E values of 10-5 or lower
(highly or moderately significant) are reported in this table.
This table does not contain matches to ribosomal proteins or unidentified
open reading frames. Information about these categories will be made available
in an extended version of this table on our web pages
http://www.genome.ou.edu/fungal.html and
http://www.dartmouth.edu/~jdunlap/
|
Clone/contig IDa |
P/E value |
Homolog identified with BLASTX |
|
|
I. Cell Division |
|||
|
DNA Synthesis/Replication |
|||
|
336 |
2E-70 |
gb|AAB94861.1| (AF014813) DNA replication licensing factor |
|
|
a5h06ne |
9E-34 |
sp|Q04832|HEXP_LEIMA DNA-BINDING PROTEIN HEXBP |
|
|
764 |
2E-18 |
sp|Q09184|CDB4_SCHPO CURVED DNA-BINDING PROTEIN |
|
|
h3c03ne |
2E-45 |
sp|Q03392|PCNA_SCHPO PROLIFERATING CELL NUCLEAR ANTIGEN |
|
|
69 |
3E-15 |
pir||T39841 topisomerase II associated protein pat1 homolog |
|
|
958 |
1E-12 |
pir||T08729 RING zinc finger protein homolog |
|
|
Cell Cycle |
|||
|
176 |
5E-09 |
dbj|BAB01955.1| (AP002059) contains similarity to AAA-type ATPase |
|
|
a8b07ne |
3E-17 |
gi|539092|pir||S38033 cell division control protein SLY2 homolog YKL196c |
|
|
c8g11ne |
6E-09 |
gi|7490204|pir||T39220 cell cycle regulator p21 |
|
|
1097 |
3E-47 |
pir||T39991 cell division control protein 47 homolog |
|
|
a1b07ne |
2E-41 |
emb|CAB76268.1| (AL158056) putative prohibitin |
|
|
g2b12ne |
4E-20 |
ref|NP_011747.1|| mitochondrial protein, prohibitin homolog |
|
|
Apoptosis |
|||
|
1076 |
2E-18 |
ref|NP_035181.1|| programmed cell death 6 |
|
|
Chromosome Structure |
|||
|
271 |
9E-69 |
sp|O43102|CBF5_ASPFU CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 |
|
|
171 |
9E-18 |
emb|CAB72936.1| (AJ011780) histone H1 |
|
|
915 |
1E-65 |
emb|CAB91279.1| (AL355927) probable suppressor protein of mitochondrial histone mutant [Neurospora crassa] |
|
|
1093 |
2E-39 |
sp|P04914|H4_NEUCR HISTONE H4 |
|
|
1408 |
2E-69 |
sp|P07041|H3_NEUCR HISTONE H3 |
|
|
1300 |
5E-46 |
sp|P08844|H2A_EMENI HISTONE H2A |
|
|
850 |
1E-50 |
sp|P23754|H2B_EMENI HISTONE H2B |
|
|
662 |
4E-08 |
pir||T41330 nucleosome assembly protein |
|
|
II. Cell Signaling/Cell Communication |
|||
|
Channels/Transport Proteins |
|||
|
c2b04nm |
3E-08 |
gb|AAD56389.1|AF182216_1 (AF182216) chloride channel CLC-5 |
|
|
808 |
E-153 |
gb|AAD45253.1| (AF135863) opsin-1 [Neurospora crassa] |
|
|
c5d12ne |
4E-43 |
pir||T41659 probable potassium channel subunit |
|
|
Effectors/Modulators |
|||
|
1040 |
5E-25 |
emb|CAA62150.1| (X90560) Calmodulin |
|
|
1317 |
2E-80 |
sp|Q02052|CALM_NEUCR CALMODULIN |
|
|
Intracellular Transducers |
|||
|
698 |
1E-58 |
sp|P34727|ARF_AJECA ADP-RIBOSYLATION FACTOR |
|
|
835 |
0.00001 |
emb|CAA72985.1| (Y12314) GTPase |
|
|
673 |
4E-25 |
gb|AAF78478.1|AF190700_1 (AF190700) small G-protein Gsp1p |
|
|
827 |
2E-38 |
gi|729566|sp|P39958|GDI1_YEAST SECRETORY PATHWAY GDP DISSOCIATION INHIBITOR |
|
|
1043 |
2E-09 |
pir||T11657 rho GDP dissociation inhibitor |
|
|
706 |
3E-08 |
sp|P28748|SPI1_SCHPO GTP-BINDING NUCLEAR PROTEIN SPI1 |
|
|
475 |
E-155 |
sp|Q01369|GBLP_NEUCR GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEIN |
|
|
h7b01ne |
7E-55 |
dbj|BAA32410.1| (AB000281) krev-1 [Neurospora crassa] |
|
|
335 |
2E-37 |
sp|P36586|YPT5_SCHPO YPT1-RELATED PROTEIN 5 |
|
|
Protein Modification |
|||
|
1228 |
1E-84 |
dbj|BAA89421.1| (AB029307) 14-3-3 |
|
|
c3f08ne |
2E-81 |
emb|CAC03748.1| (AJ290951) cAMP-dependent protein kinase catalytic subunit |
|
|
a1e12ne |
1E-39 |
gb|AAD02822.1| (AF069777) mitogen-activated protein kinase kinase CPK1 |
|
|
a3d09ne |
1E-38 |
gb|AAD50496.1|AF174649_1 (AF174649) mitogen activated protein kinase |
|
|
c1g06ne |
1E-13 |
pir||T37758 protein kinase skp1p |
|
|
a2b11ne |
2E-08 |
sp|P22987|KIN1_SCHPO PROTEIN KINASE KIN1 |
|
|
711 |
3E-88 |
sp|P87253|KPC1_NEUCR PROTEIN KINASE C-LIKE |
|
|
652 |
5E-18 |
pir||T37742 serine threonine-protein kinase |
|
|
c4d10ne |
3E-21 |
ref|NP_012651.1|| zinc metallo-protease that catalyzes the first step of N-terminal |
|
|
III. Cell Structure/Cytoskeleton |
|||
|
Cell Wall |
|||
|
1066 |
1E-24 |
emb|CAA09585.1| (AJ011296) putative cell wall protein |
|
|
1368 |
4E-44 |
ref|NP_011487.1|| soluble cell wall protein; Scw11p |
|
|
504 |
0.00001 |
ref|NP_014035.1|| soluble cell wall protein; Scw10p |
|
|
484 |
E-121 |
gb|AAF00101.1|AF127086_1 (AF127086) chitin synthase 3 [Neurospora crassa] |
|
|
1128 |
1E-24 |
sp|P29070|CHS3_NEUCR CHITIN SYNTHASE 3 |
|
|
296 |
3E-48 |
sp|Q92357|CHS5_SCHPO PROBABLE CHITIN BIOSYNTHESIS PROTEIN |
|
|
Cytoskeleton |
|||
|
a4a04ne |
1E-16 |
emb|CAB66436.1| (AL136535) actin-related protein |
|
|
1074 |
8E-48 |
gi|7492405|pir||T39044 probable Arp2-3 complex subunit |
|
|
1271 |
5E-92 |
sp|P78711|ACT_NEUCR ACTIN |
|
|
1147 |
5E-70 |
emb|CAB91201.1| (AL355925) cofilin related protein [Neurospora crassa] |
|
|
1102 |
2E-68 |
gb|AAC99460.1| (AF102992) kinesin related protein 1 |
|
|
a1d07ne |
3E-06 |
pir||A56511 myosin I myoA |
|
|
181 |
4E-25 |
pir||T38774 myosin-3 isoform, heavy chain (Type II myosin) |
|
|
f5f09nm |
8E-24 |
emb|CAB93844.1| (AL358272) similar to yeast nuclear segregation protein Bfr1 |
|
|
b9f02ne |
1E-09 |
sp|P39825|PROF_SCHPO PROFILIN |
|
|
590 |
1E-17 |
gi|482158|pir||S40911 septin CDC11 |
|
|
193 |
2E-36 |
sp|P38669|TBA2_NEUCR TUBULIN ALPHA-B CHAIN |
|
|
836 |
4E-13 |
sp|Q02088|TPM_SCHPO TROPOMYOSIN |
|
|
Motility |
|||
|
411 |
5E-46 |
ref|NP_009517.1|| Homolog to twitching motility protein |
|
|
IV. Cell/Organism Defense |
|||
|
Carrier proteins/Membrane Transport |
|||
|
1246 |
1E-47 |
dbj|BAA33011.1| (AB016807) flavohemoglobin [Fusarium oxysporum] |
|
|
Detoxification |
|||
|
1119 |
3E-80 |
gb|AAF66098.1|AF192405_1 (AF192405) putative cyanide hydratase |
|
|
100 |
2E-76 |
gb|AAF85031.1|AE004035_10 (AE004035) catalase/peroxidase |
|
|
968 |
1E-39 |
sp|P23622|CY14_NEUCR SULFATE PERMEASE II |
|
|
b4a10ne |
4E-39 |
sp|Q02068|NRL1_RHORH ALIPHATIC NITRILASE |
|
|
a7c03ne |
6E-34 |
pir||S25198 vacuolar membrane protein HMT1 |
|
|
1172 |
7E-31 |
sp|P32962|NRL2_ARATH NITRILASE 2 |
|
|
d8a09ne |
1E-15 |
dbj|BAA22793.1| (AB007905) Cad1 protein |
|
|
34 |
2E-06 |
ref|NP_014140.1|| Putative copper binding/homeostasis protein; Atx1p |
|
|
1295 |
E-176 |
emb|CAC03570.1| (AJ297565) CyPBP37 protein [Neurospora crassa] |
|
|
807 |
2E-75 |
pir||T18224 rehydrin protein homolog |
|
|
964 |
1E-12 |
ref|NP_004519.1|| microsomal glutathione S-transferase 3 |
|
|
g9c08ne |
7E-32 |
ref|NP_009602.1|| Homolog to quinone oxidoreductase |
|
|
Stress Response |
|||
|
1340 |
1E-14 |
pir||T41531 activator of Hsp70 and Hsp90 chaperones |
|
|
560 |
3E-65 |
pir||T40514 Chaperonin hsp78p - fission yeast |
|
|
h6b03ne |
5E-33 |
ref|NP_012598.1|| subunit of chaperonin subunit epsilon |
|
|
1320 |
5E-14 |
emb|CAA06818.1| (AJ006023) peptidylprolyl isomerase [Neurospora crassa] |
|
|
1392 |
1E-69 |
dbj|BAA34384.1| (AB019518) cyclophilin |
|
|
1198 |
E-105 |
sp|P10255|CYPH_NEUCR PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PRECURSOR (CYCLOPHILIN) |
|
|
h5d04ne |
4E-18 |
sp|P87051|YDJ3_SCHPO PROBABLE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
|
|
1442 |
4E-85 |
sp|P00721|LYCH_CHASP N,O-DIACETYLMURAMIDASE (LYSOZYME CH) |
|
|
1106 |
3E-78 |
emb|CAA70090.1| (Y08867) putative ER chaperone |
|
|
c1d11ne |
3E-43 |
sp|O60046|FK21_NEUCR FK506-BINDING PROTEIN PRECURSOR (FKBP-21) |
|
|
1344 |
2E-64 |
sp|P20080|FKBP_NEUCR FK506-BINDING PROTEIN (FKBP) |
|
|
769 |
8E-43 |
emb|CAA67431.1| (X98931) heat shock protein 70 |
|
|
583 |
5E-47 |
emb|CAB91199.1| (AL355925) probable heat-shock protein hsp60 [Neurospora crassa] |
|
|
1381 |
E-150 |
gb|AAF34607.1| (AF212996) heat shock protein 80 [Neurospora crassa] |
|
|
90 |
2E-50 |
sp|O43109|HS90_PODAN HEAT SHOCK PROTEIN 90 HOMOLOG |
|
|
h4g11ne |
3E-28 |
sp|O59804|CH10_SCHPO 10 KD HEAT SHOCK PROTEIN, MITOCHONDRIAL (HSP10) |
|
|
505 |
9E-67 |
sp|P19752|HS30_NEUCR 30 KD HEAT SHOCK PROTEIN |
|
|
1109 |
2E-96 |
sp|Q01233|HS70_NEUCR HEAT SHOCK 70 KD PROTEIN (HSP70) |
|
|
a3e10ne |
6E-29 |
gb|AAF70857.1|AF152925_1 (AF152925) PalC |
|
|
823 |
4E-28 |
pir||T39892 probable prefoldin subunit |
|
|
91 |
4E-13 |
ref|NP_014494.1|| Peroxisomal membrane protein; Pex11p |
|
|
1187 |
2E-26 |
sp|O14313|PM20_SCHPO PEROXISOMAL MEMBRANE PROTEIN PMP20 |
|
|
791 |
1E-33 |
sp|O43099|PM20_ASPFU PROBABLE PEROXISOMAL MEMBRANE PROTEIN PMP20 |
|
|
117 |
2E-15 |
pir||T38661 stress response protein rds1p |
|
|
b9c05ne |
3E-44 |
sp|Q10147|TCPB_SCHPO PROBABLE T-COMPLEX PROTEIN 1, BETA SUBUNIT |
|
|
1359 |
5E-71 |
emb|CAB92637.1| (AL356815) related to YRO2 protein [Neurospora crassa] |
|
|
1044 |
0.00002 |
pir||T15174 hypothetical protein C48E7.3 |
|
|
309 |
E-107 |
emb|CAB97292.1| (AL389890) probable zuotin [Neurospora crassa] |
|
|
V. Metabolism |
|||
|
Amino Acid |
|||
|
c6e12ne |
2E-48 |
gb|AAB81248.1| (AF013601) acetolactate synthase |
|
|
b3b10ne |
0.00002 |
pir||G70806 probable acetolactate synthase |
|
|
470 |
4E-44 |
pir||T39679 argininosuccinate lyase |
|
|
38 |
1E-63 |
sp|P14010|GATA_EMENI 4-AMINOBUTYRATE AMINOTRANSFERASE |
|
|
1037 |
1E-85 |
sp|P23623|OXLA_NEUCR L-AMINO ACID OXIDASE PRECURSOR |
|
|
d4g05ne |
5E-22 |
ref|NP_011980.1|| Cystathionine gamma-synthase; Yhr112cp |
|
|
d9h02ne |
2E-50 |
emb|CAA62973.1| (X91867) CPC3 protein [Neurospora crassa] |
|
|
645 |
E-106 |
gb|AAB28355.1| (S66039) NAD(+)-specific glutamate dehydrogenase [Neuorspora crassa] |
|
|
544 |
2E-61 |
pir||T41722 probable gamma-glutamyl phosphate reductase |
|
|
889 |
5E-79 |
sp|Q12613|GLNA_COLGL GLUTAMINE SYNTHETASE |
|
|
1007 |
3E-84 |
gi|2853023|gb|AAC02221.1| (AF045455) histidine-3 protein [Neurospora crassa] |
|
|
266 |
1E-17 |
prf||2004294A beta isopropylmalate dehydrogenase [Neurospora crassa] |
|
|
981 |
6E-34 |
sp|O59736|LEU1_SCHPO 2-ISOPROPYLMALATE SYNTHASE |
|
|
16 |
1E-109 |
sp|P38674|ILV5_NEUCR KETOL-ACID REDUCTOISOMERASE PRECURSOR |
|
|
1268 |
4E-70 |
pir||T40384 probable methionine aminopeptidase 1 |
|
|
408 |
2E-77 |
sp|P27121|DCOR_NEUCR ORNITHINE DECARBOXYLASE |
|
|
133 |
1E-75 |
emb|CAB76044.1| (AL157918) ornithine aminotransferase |
|
|
1254 |
5E-96 |
gb|AAF72527.1|AF252630_1 (AF252630) delta-1-pyrroline-5-carboxylate dehydrogenase |
|
|
794 |
5E-74 |
gb|AAF72528.1|AF252631_1 (AF252631) proline oxidase |
|
|
929 |
1E-17 |
gb|AAF86990.1|AF282249_9 (AF282249) ArcT |
|
|
543 |
4E-25 |
pir||T40091 probable serine palmitoyltransferase |
|
|
d2f10ne |
2E-85 |
sp|P34898|GLYC_NEUCR SERINE HYDROXYMETHYLTRANSFERASE |
|
|
616 |
1E-88 |
sp|P38997|LYS1_YARLI SACCHAROPINE DEHYDROGENASE |
|
|
300 |
1E-74 |
sp|Q9Y8H7|SPEE_NEUCR SPERMIDINE SYNTHASE |
|
|
1255 |
2E-07 |
sp|Q06087|TYD3_PETCR TYROSINE DECARBOXYLASE |
|
|
Cofactors |
|||
|
865 |
2E-82 |
emb|CAB65619.1| (AL136078) putative GTP cyclohydrolase |
|
|
1238 |
1E-08 |
emb|CAB85691.1| (AJ271697) riboflavin aldehyde-forming enzyme |
|
|
557 |
8E-33 |
gb|AAA34529.1| (J03873) coproporphyrinogen oxidase (EC 1.3.3.3) |
|
|
1208 |
E-112 |
gb|AAC64375.1| (U68718) thiamine synthase homolog |
|
|
1161 |
E-103 |
gb|AAD49809.1|AF133101_1 (AF133101) PYROA |
|
|
b1h01ne |
5E-42 |
pir||T39218 pyridoxal reductase |
|
|
990 |
5E-67 |
sp|P38681|NIR_NEUCR NITRITE REDUCTASE |
|
|
482 |
2E-13 |
sp|P42882|NMT1_ASPPA NMT1 PROTEIN HOMOLOG |
|
|
c4d09ne |
3E-37 |
gb|AAD55372.1|AF148449_1 (AF148449) 6,7-dimethyl-8-ribityllumazine synthase |
|
|
Energy/TCA Cycle |
|||
|
b1h03ne |
7E-16 |
pir||E75296 aldo/keto reductase |
|
|
143 |
E-107 |
emb|CAB88555.1| (AL353819) probable atp-specific succinyl-coa synthetase alpha |
|
|
999 |
4E-47 |
gb|AAC61778.1| (AF093142) aconitase |
|
|
a3h08ne |
1E-26 |
gi|11r984|sp|P05202|AATM_MOUSE ASPARTATE AMINOTRANSFERASE |
|
|
a8g05ne |
6E-41 |
gi|1703228|sp|P52893|ALAM_YEAST PUTATIVE ALANINE AMINOTRANSFERASE |
|
|
d5c02ne |
1E-27 |
gi|1706382|sp|P47771|DHA5_YEAST ALDEHYDE DEHYDROGENASE |
|
|
559 |
1E-19 |
gi|2688543|gb|AAC66974.1| (AE001163) acetate kinase |
|
|
1003 |
8E-49 |
sp|O13349|ATPF_KLULA ATP SYNTHASE SUBUNIT 4 |
|
|
352 |
1E-31 |
sp|O13350|ATP7_KLULA ATP SYNTHASE D CHAIN, MITOCHONDRIAL |
|
|
531 |
1E-07 |
sp|O13931|AT18_SCHPO PUTATIVE ATP SYNTHASE J CHAIN |
|
|
1257 |
2E-63 |
sp|P00842|ATP9_NEUCR ATP SYNTHASE PROTEIN 9 |
|
|
984 |
E-107 |
sp|P23704|ATPB_NEUCR ATP SYNTHASE BETA CHAIN |
|
|
1367 |
E-116 |
sp|P37211|ATPA_NEUCR ATP SYNTHASE ALPHA CHAIN |
|
|
1269 |
3E-87 |
sp|P40108|DHAL_CLAHE ALDEHYDE DEHYDROGENASE |
|
|
948 |
2E-70 |
sp|P56525|ATPD_NEUCR ATP SYNTHASE DELTA CHAIN |
|
|
312 |
4E-83 |
sp|Q01355|AOX_NEUCR ALTERNATIVE OXIDASE PRECURSOR |
|
|
1374 |
2E-07 |
gi|3913153|sp|P81449|ATPJ_YEAST ATP SYNTHASE E CHAIN |
|
|
722 |
8E-52 |
ref|NP_010933.1|| ATP-dependent metalloprotease; Afg3p |
|
|
322 |
9E-30 |
gb|AAB59549.1| (J04474) branched-chain alpha-keto acid dehydrogenase |
|
|
688 |
2E-16 |
emb|CAB77626.1| (AJ251827) putative cytochrome B5 reductase |
|
|
g9e10ne |
1E-24 |
gi|399286|sp|Q01519|COXG_YEAST CYTOCHROME C OXIDASE |
|
|
821 |
3E-24 |
pir||T41677 probable nadh-cytochrome b5 reductase |
|
|
1155 |
5E-07 |
ref|NP_010216.1|| Subunit VIIa of cytochrome c oxidase; Cox9p |
|
|
1275 |
2E-22 |
ref|NP_011918.1|| subunit VI of cytochrome c oxidase; Cox6p |
|
|
a3a10ne |
7E-26 |
ref|NP_013304.1|| involved in maturation of COX1 and COB mRNA; Mss51p |
|
|
1019 |
1E-16 |
sp|O74471|COXE_SCHPO PROBABLE CYTOCHROME C OXIDASE POLYPEPTIDE VIA |
|
|
1035 |
5E-60 |
sp|P00048|CYC_NEUCR CYTOCHROME C |
|
|
b2a10nm |
6E-91 |
sp|P00411|COX2_NEUCR CYTOCHROME C OXIDASE POLYPEPTIDE II |
|
|
b9b12ne |
2E-75 |
sp|P06810|COX5_NEUCR CYTOCHROME C OXIDASE POLYPEPTIDE V PRECURSOR |
|
|
a6c07ne |
3E-13 |
sp|P49096|CYB5_MUSDO CYTOCHROME B5 |
|
|
918 |
2E-77 |
sp|P78574|CATA_ASPFU CATALASE A |
|
|
h8b02ne |
1E-35 |
sp|Q00616|NOR1_CYLTO CYTOCHROME P450 55A2 |
|
|
a1c12ne |
9E-25 |
gi|549725|sp|P36060|MCR1_YEAST NADH-CYTOCHROME B5 REDUCTASE PRECURSOR |
|
|
496 |
2E-30 |
gb|AAA85778.1| (L41670) fumarylacetoacetate hydrolase |
|
|
80 |
1E-07 |
gi|3873913|emb|CAA95783.1| (Z71258) similar to Flavin-binding monooxygenase-like |
|
|
218 |
1E-37 |
pir||T00433 fumarate hydratase |
|
|
g7a06ne |
4E-33 |
pir||T37806 probable flavoprotein subunit |
|
|
c4b01ne |
4E-38 |
dbj|BAA86935.1| (AB029553) glutaminase A |
|
|
1023 |
1E-56 |
emb|CAB88564.1| (AL353819) probable glutaredoxin [Neurospora crassa] |
|
|
562 |
6E-33 |
emb|CAB92626.1| (AL356815) probable glutamate synthase (NADPH) [Neurospora crassa] |
|
|
750 |
3E-75 |
emb|CAB62099.1| (AL133306) probable isocitrate dehydrogenase [nad] subunit 2 |
|
|
c6h06nm |
5E-32 |
ref|NP_014779.1|| NAD+-dependent isocitrate dehydrogenase; Idh2p |
|
|
995 |
5E-54 |
ref|NP_015190.1|| Iron-sulfur cluster nifU-like protein; Isu1p |
|
|
525 |
9E-41 |
sp|Q12627|DLD1_KLULA D-LACTATE DEHYDROGENASE |
|
|
1063 |
3E-48 |
emb|CAA76361.1| (Y16748) malate dehydrogenase |
|
|
1318 |
E-121 |
gb|AAD28503.1|AF118809_1 (AF118809) manganese superoxide dismutase precursor [Neurospora crassa] |
|
|
1176 |
3E-78 |
gb|AAF66995.1|AF062654_1 (AF062654) manganese superoxide dismutase |
|
|
1204 |
E-118 |
gi|547901|sp|P17505|MDHM_YEAST MALATE DEHYDROGENASE |
|
|
1140 |
5E-55 |
sp|P28345|MASY_NEUCR MALATE SYNTHASE, GLYOXYSOMAL |
|
|
561 |
2E-23 |
dbj|BAA22375.1| (D86491) Nfrl |
|
|
725 |
2E-23 |
emb|CAB91381.1| (AL355930) probable oligomycin sensitivity conferring protein (ATP5) [Neurospora crassa] |
|
|
647 |
3E-13 |
pir||D72377 oxidoreductase, short chain dehydrogenase/reductase family |
|
|
1330 |
2E-19 |
sp|P22009|PX18_CANTR OLEATE-INDUCED PEROXISOMAL PROTEIN POX18 |
|
|
123 |
7E-44 |
sp|Q10216|YAY8_SCHPO HYPOTHETICAL OXIDOREDUCTASE C4H3.08 |
|
|
a6h07ne |
5E-25 |
emb|CAA04820.1| (AJ001540) phenylacetyl-CoA ligase |
|
|
c1f09ne |
2E-63 |
emb|CAB97287.1| (AL389890) probable pyruvate dehydrogenase (lipoamide) beta chain |
|
|
1345 |
1E-26 |
gb|AAC08303.1| (AF021797) peroxisomal receptor for PTS2-containing proteins Pex7p |
|
|
i8h02nm |
3E-15 |
gb|AAC78141.1| (AF100985) phosphopyruvate hydratase |
|
|
1056 |
6E-31 |
gi|2773203|gb|AAB96720.1| (AF039713) Similar to phosphoglycerate mutase |
|
|
c6b09ne |
1E-54 |
sp|P19117|IPYR_SCHPO INORGANIC PYROPHOSPHATASE |
|
|
339 |
5E-80 |
sp|P11913|MPPB_NEUCR MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT PRECURSOR |
|
|
1226 |
1E-15 |
emb|CAB66444.1| (AL136535) putative succinate dehydrogenase membrane anchor subunit |
|
|
371 |
3E-66 |
gi|1078403|pir||S57160 sulfite reductase homolog |
|
|
641 |
4E-61 |
sp|O42772|DHSB_MYCGR SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN |
|
|
368 |
5E-45 |
sp|P07509|SODC_NEUCR SUPEROXIDE DISMUTASE [CU-ZN] |
|
|
539 |
2E-18 |
sp|P09367|SDHL_RAT L-SERINE DEHYDRATASE/L-THREONINE DEAMINASE |
|
|
1397 |
3E-29 |
pir||T41575 ubiquinol-cytochrome c reductase complex subunit |
|
|
e2d09ne |
4E-72 |
p|P25284|NUEM_NEUCR NADH-UBIQUINONE OXIDOREDUCTASE 40 KD SUBUNIT PRECURSOR |
|
|
664 |
6E-57 |
sp|O47950|NUKM_NEUCR PROBABLE NADH-UBIQUINONE OXIDOREDUCTASE 19.3 KDA SUBUNIT |
|
|
542 |
3E-42 |
sp|P40915|NUHM_NEUCR NADH-UBIQUINONE OXIDOREDUCTASE 24 KD SUBUNIT PRECURSOR |
|
|
148 |
2E-68 |
sp|P42114|NB4M_NEUCR NADH-UBIQUINONE OXIDOREDUCTASE 14.8 KD SUBUNIT |
|
|
264 |
5E-42 |
sp|P48503|UCRQ_NEUCR ubiquinol-cytochrome c reductase complex ubiquinone-binding protein |
|
|
161 |
2E-06 |
sp|Q02369|NI2M_BOVIN NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT |
|
|
f9e02ne |
2E-37 |
sp|Q02854|NUXM_NEUCR NADH-UBIQUINONE OXIDOREDUCTASE 21 KD SUBUNIT |
|
|
659 |
0.00001 |
sp|Q9UDW1|UCRX_HUMAN UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.2 KDA PROTEIN |
|
|
Lipid |
|||
|
1138 |
1E-10 |
emb|CAB75318.1| (AL139164) putative acetyltransferase |
|
|
863 |
2E-10 |
gb|AAG05400.1|AE004627_8 (AE004627) probable acyl-CoA carboxylase alpha chain |
|
|
1297 |
2E-47 |
gb|AAG05938.1|AE004683_2 (AE004683) probable acyl-CoA dehydrogenase |
|
|
455 |
4E-35 |
gb|AAG06956.1|AE004777_9 (AE004777) probable acetyl-coa synthetase |
|
|
1210 |
6E-57 |
pir||T39899 acetyl-coa acetyltransferase - fission yeast |
|
|
631 |
E-140 |
emb|CAA12224.1| (AJ224922) ATP citrate lyase |
|
|
191 |
2E-16 |
gi|1545805|dbj|BAA10929.1| (D64052) cytochrome P450 |
|
|
d5h09ne |
5E-27 |
gi|1706683|sp|P53045|ER25_YEAST C-4 METHYL STEROL OXIDASE |
|
|
1123 |
4E-08 |
pir||T02955 probable cytochrome P450 monooxygenase |
|
|
796 |
2E-72 |
gb|AAD47296.1| (AF017140) dihydrolipoamide succinyltransferase |
|
|
c5a02ne |
7E-31 |
gi|1706682|sp|P32377|ER19_YEAST DIPHOSPHOMEVALONATE |
|
|
51 |
1E-23 |
gb|AAF71293.1|AF262756_1 (AF262756) 14-a demethylase |
|
|
885 |
1E-23 |
dbj|BAA82526.1| (AB030037) fatty acid omega-hydroxylase |
|
|
a3c08ne |
2E-06 |
emb|CAB89463.1| (AL354048) putative fatty acid synthase |
|
|
c7c02ne |
4E-14 |
pir||T06332 ferric leghemoglobin reductase isoenzyme 2 precursor |
|
|
1177 |
5E-45 |
gb|AAF40140.1|AF208040_1 (AF208040) beta (1-3) glucanosyltransferase Gel3p |
|
|
b6c02ne |
5E-89 |
emb|CAB91699.1| (AL356172) probable hydroxymethylglutaryl-CoA synthase [Neurospora crassa] |
|
|
a3b07nm |
1E-31 |
sp|Q05493|THIK_YARLI 3-KETOACYL-COA THIOLASE, PEROXISOMAL PRECURSOR |
|
|
a8e01ne |
3E-27 |
sp|P32949|LIP5_CANRU LIPASE 5 PRECURSOR |
|
|
1031 |
3E-45 |
gb|AAA67356.1| (U12536) 3-methylcrotonyl-CoA carboxylase precursor |
|
|
c1d01nm |
3E-43 |
gb|AAF04489.1|AF148505_1 (AF148505) methylmalonate-semialdehyde dehydrogenase |
|
|
305 |
3E-56 |
sp|P52713|MMSA_CAEEL PROBABLE METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE |
|
|
1072 |
2E-52 |
emb|CAB91484.1| (AL355933) probable oxoglutarate dehydrogenase precursor [Neurospora crassa] |
|
|
a6a04ne |
5E-40 |
emb|CAA04820.1| (AJ001540) phenylacetyl-CoA ligase |
|
|
c5c09ne |
7E-06 |
gb|AAD14518.1| (AC006200) putative phosphatidic acid phosphatase |
|
|
1231 |
8E-85 |
gi|586339|sp|P38137|FAT2_YEAST PEROXISOMAL-COENZYME A SYNTHETASE |
|
|
221 |
5E-40 |
pir||T40015 phosphatidylethanolamine methyltransferase |
|
|
a9b09ne |
0.00005 |
pir||T40445 phosphatidic acid phosphatase homolog |
|
|
1252 |
3E-24 |
sp|P16387|ODPA_YEAST PYRUVATE DEHYDROGENASE E1 COMPONENT ALPHA SUBUNIT |
|
|
46 |
5E-70 |
emb|CAB92021.1| (AL356324) probable beta-succinyl CoA synthetase precursor |
|
|
236 |
1E-72 |
emb|CAB97289.1| (AL389890) probable DELTA(24)-STEROL C-METHYLTRANSFERASE (ERG6) [Neurospora crassa] |
|
|
363 |
3E-85 |
pir||S52745 stearoyl-CoA desaturase |
|
|
668 |
6E-34 |
sp|O13750|SUCA_SCHPO PROBABLE SUCCINYL-COA LIGASE [GDP-FORMING] ALPHA-CHAIN |
|
|
40 |
5E-49 |
sp|Q92206|ERG1_CANAL SQUALENE MONOOXYGENASE |
|
|
d4f06ne |
9E-11 |
pir||E71406 probable carnitine racemase |
|
|
Nucleotide |
|||
|
767 |
1E-10 |
gi|1709915|sp|P38009|PU92_YEAST BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN ADE17 |
|
|
g4c01ne |
1E-66 |
emb|CAB88595.1| (AL353820) ankyrin repeat-containing YAR1 related protein |
|
|
636 |
2E-06 |
gi|137110|sp|P27515|URK1_YEAST URIDINE KINASE |
|
|
1131 |
9E-58 |
sp|Q00511|URIC_ASPFL URICASE |
|
|
1143 |
4E-85 |
sp|Q9UUY8|NDK_NEUCR NUCLEOSIDE DIPHOSPHATE KINASE |
|
|
14 |
4E-53 |
ref|NP_009409.1|| phosphoribosyl amino imidazolesuccinocarbozamide synthetase; Ade1p |
|
|
Sugar/Glycolysis |
|||
|
1283 |
E-148 |
emb|CAB91241.1| (AL355926) ALCOHOL DEHYDROGENASE I-ADH1 [Neurospora crassa] |
|
|
939 |
1E-24 |
gb|AAB71082.1| (U66411) putative type III alcohol dehydrogenase |
|
|
223 |
9E-14 |
pir||F69905 probable alcohol dehydrogenase (EC 1.1.1.-) yogA |
|
|
818 |
1E-33 |
pir||T39671 alcohol dehydrogenase - fission yeast |
|
|
578 |
6E-11 |
sp|P26612|AMY2_ECOLI CYTOPLASMIC ALPHA-AMYLASE |
|
|
98 |
3E-57 |
emb|CAA60825.1| (X87371) carbamyl phosphate synthetase |
|
|
928 |
E-137 |
emb|CAB99175.1| (AL390189) probable dolichyl-phosphate-mannose--protein mannosyltransferase [Neurospora crassa] |
|
|
407 |
4E-41 |
gb|AAD30975.1|AF121895_1 (AF121895) dolichol-phosphate-mannose synthase |
|
|
340 |
3E-12 |
gb|AAF01464.1|AF189370_1 (AF189370) dolichyl-phosphate beta-glucosyltransferase |
|
|
1402 |
5E-22 |
pir||T41540 probable short chain dehydrogenase |
|
|
612 |
2E-23 |
ref|NP_003850.1|| dolichyl-phosphate mannosyltransferase polypeptide 1 |
|
|
501 |
2E-61 |
sp|P42040|ENO_CLAHE ENOLASE |
|
|
1115 |
2E-71 |
sp|P53444|ALF_NEUCR FRUCTOSE-BISPHOSPHATE ALDOLASE |
|
|
1321 |
7E-45 |
emb|CAB60235.1| (AL132828) putative glycosyltransferase |
|
|
963 |
3E-81 |
emb|CAB91426.1| (AL355932) glucan 1, 4-alpha-glucosidase [Neurospora crassa] |
|
|
607 |
1E-66 |
gb|AAF17102.1|AF208225_2 (AF208225) alpha-glucosidase AgdA |
|
|
c1c06ne |
2E-15 |
pir||T35164 probable secreted glucosidase |
|
|
262 |
8E-17 |
ref|NP_009574.1|| galactose-1-phosphate uridyl transferase; Gal7p |
|
|
1448 |
9E-177 |
sp|P54118| glyceraldehyde-3-phosphate dehydrogenase (ccg-7) [Neurospora crassa] |
|
|
1135 |
2E-64 |
emb|CAA28273.1| (X04604) glycogen phosphorylase |
|
|
472 |
6E-44 |
ref|NP_015486.1|| Glycogen phosphorylase; Gph1p |
|
|
b9e11ne |
4E-29 |
ref|NP_034424.1|| glucokinase activity, related sequence 2 |
|
|
1310 |
E-13 |
sp|Q92407|HXKG_ASPNG GLUCOKINASE |
|
|
1069 |
6E-17 |
pir||T39569 probable alpha-glucan synthase |
|
|
874 |
2E-25 |
emb|CAA08922.1| (AJ009973) hexokinase |
|
|
310 |
3E-15 |
emb|CAB75871.1| (AL157811) 2-hydroxyacid dehydrogenase |
|
|
57 |
8E-17 |
gb|AAB63461.1| (AF009036) NAD(+)-isocitrate dehydrogenase subunit I |
|
|
281 |
8E-70 |
sp|P79089|IDHP_ASPNG ISOCITRATE DEHYDROGENASE [NADP], MITOCHONDRIAL PRECURSOR |
|
|
699 |
6E-39 |
pir||S63701 mannosyl-oligosaccharide 1,2-alpha-mannosidase precursor |
|
|
12 |
7E-46 |
ref|NP_009758.1|| Putative alpha-1,2-mannosyltransferase; Ktr4p |
|
|
902 |
3E-75 |
sp|P28345|MASY_NEUCR MALATE SYNTHASE, GLYOXYSOMAL |
|
|
327 |
2E-27 |
sp|P11178|ODBA_BOVIN 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT |
|
|
841 |
E-111 |
gb|AAF36531.1|AF135264_1 (AF135264) phosphoglucomutase |
|
|
1199 |
1E-32 |
ref|NP_011105.1|| alpha subunit of pyruvate dehydrogenase |
|
|
1382 |
5E-66 |
sp|O13434|PPCK_CANAL PHOSPHOENOLPYRUVATE CARBOXYKINASE |
|
|
1151 |
5E-72 |
sp|P31865|KPYK_TRIRE PYRUVATE KINASE |
|
|
1423 |
5E-219 |
sp|P38667|PGK_NEUCR PHOSPHOGLYCERATE KINASE |
|
|
h3a05ne |
7E-31 |
gi|1173139|sp|P46969|RPE_YEAST RIBULOSE-PHOSPHATE 3-EPIMERASE |
|
|
248 |
5E-66 |
dbj|BAA13834.1| (D89172) similar to transketolase 2 |
|
|
790 |
6E-40 |
dbj|BAA24182.1| (AB010049) transaldolase |
|
|
261 |
1E-42 |
emb|CAA45835.1| (X64537) triosephosphate isomerase |
|
|
a8e10ne |
7E-12 |
gb|AAF61430.1|AF136944_1 (AF136944) trehalase |
|
|
245 |
6E-10 |
pir||T18231 transketolase I |
|
|
901 |
1E-23 |
sp|O42622|TREB_MAGGR NEUTRAL TREHALASE |
|
|
c6f01ne |
7E-58 |
sp|P78811|UDPG_SCHPO PROBABLE UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
|
|
Transport |
|||
|
308 |
8E-31 |
gi|130720|sp|P23968|VATO_YEAST VACUOLAR ATP SYNTHASE 22 KD PROTEOLIPID SUBUNIT |
|
|
477 |
2E-17 |
pir||T39088 probable vacuolar h(+)-atpase subunit |
|
|
a5h12ne |
5E-23 |
sp|O94270|ERD2_SCHPO ER LUMEN PROTEIN RETAINING RECEPTOR |
|
|
777 |
1E-73 |
sp|P02723|ADT_NEUCR ADP,ATP CARRIER PROTEIN |
|
|
974 |
3E-49 |
sp|P11943|ACPM_NEUCR ACYL CARRIER PROTEIN |
|
|
200 |
4E-52 |
sp|P31413|VATL_NEUCR VACUOLAR ATP SYNTHASE 16 KD PROTEOLIPID SUBUNIT |
|
|
g2d08ne |
7E-88 |
sp|P53659|VATX_NEUCR VACUOLAR ATP SYNTHASE SUBUNIT AC39 |
|
|
h6g06ne |
2E-59 |
sp|Q01290|VPH1_NEUCR VACUOLAR ATP SYNTHASE 98 KD SUBUNIT |
|
|
524 |
2E-42 |
sp|Q99128|ADG_USTMA GAMMA-ADAPTIN |
|
|
153 |
5E-10 |
sp|P78713|VATG_NEUCR VACUOLAR ATP SYNTHASE SUBUNIT G |
|
|
i4h12nm |
2E-55 |
pir||S44066 H+-transporting ATP synthase (EC 3.6.1.34) protein 6 |
|
|
a3c11ne |
1E-95 |
emb|CAB65295.1| (AJ243517) putative calcium P-type ATPase [Neurospora crassa] |
|
|
a7c10ne |
6E-32 |
emb|CAB88550.1| (AL353819) related to carboxylic acid transport protein JEN1 |
|
|
564 |
3E-07 |
ref|NP_013515.1|| Copper Transporter; Ctr3p |
|
|
412 |
1E-14 |
emb|CAB76027.1| (AL157917) ap-1 golgi-associated clathrin assembly protein |
|
|
1429 |
E-101 |
gb|AAF78478.1|AF190700_1 (AF190700) small G-protein Gsp1p |
|
|
e4c08ne |
2E-43 |
gi|549795|sp|P36017|YP51_YEAST GTP-BINDING PROTEIN YPT51/VPS21 |
|
|
1266 |
3E-12 |
pir||T41464 probable Golgi membrane protein |
|
|
c4a06ne |
3E-27 |
sp|O74713|HGT1_CANAL HIGH-AFFINITY GLUCOSE TRANSPORTER |
|
|
1058 |
1E-57 |
sp|P78695|GR78_NEUCR 78 KDA GLUCOSE-REGULATED PROTEIN HOMOLOG |
|
|
1357 |
7E-14 |
gi|3183036|sp|Q06142|IMB1_YEAST IMPORTIN BETA-1 SUBUNIT |
|
|
113 |
2E-09 |
emb|CAB64692.1| (Y18127) kexin precursor |
|
|
978 |
8E-27 |
emb|CAB99236.1| (AL390218) related to myo-inositol transport protein ITR1 |
|
|
214 |
3E-75 |
emb|CAC04445.1| (AL391572) probable 2-oxoglutarate/malate translocator [Neurospora crassa] |
|
|
251 |
1E-40 |
gb|AAA33597.1| (J05484) matrix processing peptidase [Neurospora crassa] |
|
|
140 |
1E-39 |
pir||T40336 probable MSF transporter - fission yeast |
|
|
b4c06ne |
4E-08 |
ref|NP_012608.1|| nuclear protein that interacts with GTP-Gsp1p; Mog1p |
|
|
426 |
2E-81 |
sp|P07144|PORI_NEUCR OUTER MITOCHONDRIAL MEMBRANE PROTEIN PORIN |
|
|
74 |
1E-62 |
sp|P18696|PUTX_EMENI PROLINE-SPECIFIC PERMEASE |
|
|
431 |
5E-67 |
sp|Q01294|CARP_NEUCR VACUOLAR PROTEASE A PRECURSOR |
|
|
588 |
3E-31 |
pir||T39672 ran-spi1 binding protein - fission yeast |
|
|
1375 |
1E-66 |
sp|Q92253|RCO3_NEUCR PROBABLE GLUCOSE TRANSPORTER RCO-3 |
|
|
1436 |
9E-46 |
emb|CAB75124.1| (AL139075) putative sugar transporter |
|
|
c4c09ne |
2E-21 |
gb|AAA57229.1| (L07492) sugar transport protein |
|
|
263 |
E-141 |
gb|AAF72704.1|AF262964_1 (AF262964) putative SNARE protein; SYN [Neurospora crassa] |
|
|
b8e07ne |
6E-17 |
pir||T12065 endoplasmic reticulum insertion protein SEC61 |
|
|
a7a05ne |
3E-21 |
pir||T40448 translocation protein SEC66 homolog |
|
|
c5e10ne |
8E-07 |
pir||T40841 secretory pathway protein |
|
|
c6b12ne |
4E-06 |
pir||T41469 probable secretory protein |
|
|
104 |
5E-26 |
ref|NP_003974.1|| solute carrier family 7 (cationic amino acid transporter) |
|
|
604 |
8E-07 |
ref|NP_013657.1|| subunit of signal peptidase complex |
|
|
1303 |
2E-20 |
sp|Q09827|S61G_SCHPO PUTATIVE PROTEIN TRANSPORT PROTEIN SEC61 GAMMA SUBUNIT |
|
|
a5d01ne |
5E-31 |
sp|Q10137|SC14_SCHPO PUTATIVE SEC14 CYTOSOLIC FACTOR |
|
|
a5d12ne |
2E-58 |
emb|CAB91213.1| (AL355925) syntaxin 8 related protein [Neurospora crassa] |
|
|
g9g11ne |
0.00001 |
emb|CAB83151.1| (AL162691) transporter-like protein |
|
|
1412 |
2E-85 |
gb|AAB61278.1| (AF001033) putative 20kDa subunit of the V-ATPase [Neurospora crassa] |
|
|
895 |
3E-31 |
ref|NP_015260.1|| involved in vacuolar protein targeting; Vps28p |
|
|
1183 |
1E-33 |
ref|NP_011259.1|| high-affinity zinc transport protein; Zrt1p |
|
|
VI. Protein Synthesis |
|||
|
Post-translational Modification/Targeting |
|||
|
235 |
4E-29 |
emb|CAB92410.1| (AJ011990) calreticulin-like protein |
|
|
d2h03ne |
7E-23 |
dbj|BAB11922.1| (AB038362) esterase D |
|
|
1362 |
3E-17 |
pir||T35294 probable endo alpha-1,4 polygalactosaminidase |
|
|
150 |
0.00003 |
ref|NP_014732.1|| small GTP-binding protein; geranylgeranylated |
|
|
471 |
4E-23 |
sp|P55059|PDI_HUMIN PROTEIN DISULFIDE ISOMERASE PRECURSOR |
|
|
596 |
3E-36 |
sp|Q92249|ER38_NEUCR PUTATIVE DISULFIDE ISOMERASE ERP38 |
|
|
138 |
3E-39 |
emb|CAB75415.1| (AL139314) ubiquitin conjugating enzyme |
|
|
1201 |
8E-64 |
gb|AAA56880.1| (U01220) ubiquitin/S27a fusion protein [Neurospora crassa] |
|
|
9 |
2E-68 |
gb|AAC13689.1| (AF056623) ubiquitin fusion protein |
|
|
1004 |
7E-80 |
gb|AAC39499.1| (AF030296) ubiquitin conjugating enzyme UBC1 |
|
|
871 |
2E-62 |
gb|AAD42941.1|AF091621_1 (AF091621) ubiquitin-conjugating enzyme E2 |
|
|
571 |
5E-30 |
pir||T39286 probable ubiquitin-protein ligase |
|
|
a3b02ne |
6E-08 |
pir||T40313 ubiquitin-like modifier |
|
|
269 |
3E-10 |
pir||T41737 ubiquitin-conjugating-enzyme-like protein |
|
|
1428 |
E-121 |
pir||UQNC polyubiquitin 4 [Neurospora crassa] |
|
|
a2b02ne |
1E-06 |
ref|NP_010798.1|| ubiquitin-like protein; Smt3p |
|
|
a1d01ne |
3E-69 |
sp|P52493|UBC2_NEUCR UBIQUITIN-CONJUGATING ENZYME |
|
|
Protein Turnover |
|||
|
346 |
3E-35 |
ref|NP_013618.1|| proteasome component Y7; Pre8p |
|
|
c6f09ne |
7E-36 |
emb|CAB95999.1| (AL360054) AAA family ATPase with similarity to katanin |
|
|
a3a09ne |
9E-34 |
dbj|BAB09831.1| (AB006708) ATP-dependent protease proteolytic subunit ClpP-like |
|
|
b1d02ne |
5E-10 |
gb|AAC03564.2| (AF047689) subtilisin-like serine protease |
|
|
76 |
2E-27 |
gi|1352918|sp|P47154|ST24_YEAST CAAX PRENYL PROTEASE 1 |
|
|
550 |
1E-32 |
gi|2507240|sp|P32329|YAP3_YEAST ASPARTIC PROTEINASE 3 |
|
|
b8h08nm |
5E-40 |
pir||T39572 probable proteinase subunit |
|
|
876 |
8E-51 |
p|Q01294|CARP_NEUCR VACUOLAR PROTEASE A PRECURSOR |
|
|
a9c06ne |
2E-84 |
sp|Q09769|LONM_SCHPO PUTATIVE MITOCHONDRIAL ATP-DEPENDENT PROTEASE PRECURSOR |
|
|
a9g08ne |
2E-22 |
ref|NP_036232.1|| aspartyl aminopeptidase |
|
|
298 |
4E-61 |
sp|P30574|CBPY_CANAL CARBOXYPEPTIDASE Y PRECURSOR |
|
|
b3g10ne |
5E-12 |
sp|P34946|CPS1_PENJA CARBOXYPEPTIDASE S |
|
|
106 |
2E-36 |
sp|P52718|PEPF_ASPNG SERINE-TYPE CARBOXYPEPTIDASE F PRECURSOR |
|
|
635 |
2E-36 |
emb|CAB88559.1| (AL353819) probable 26S ATP/ubiquitin-dependent proteinase chain S4 [Neurospora crassa] |
|
|
813 |
1E-54 |
emb|CAB91191.1| (AL355925) probable 26s proteasome p44.5 protein [Neurospora crassa] |
|
|
1013 |
4E-73 |
emb|CAB91305.1| (AL355928) probable 26S protease subunit (SUG1) protein [Neurospora crassa] |
|
|
b8a01ne |
2E-37 |
emb|CAB91768.1| (AL356173) probable 26S proteasome regulatory particle chain RPT1 [Neurospora crassa] |
|
|
a8g09ne |
5E-55 |
gi|130858|sp|P21243|PRCI_YEAST PROTEASOME COMPONENT |
|
|
b8b03ne |
2E-10 |
gi|130882|sp|P23724|PRC5_YEAST POTENTIAL PROTEASOME COMPONENT C5 |
|
|
g1d08ne |
7E-21 |
pir||T39054 probable proteasome component |
|
|
787 |
1E-95 |
p|Q09682|PRC9_SCHPO PUTATIVE PROTEASOME COMPONENT C9/Y13 |
|
|
1008 |
3E-70 |
ref|NP_012533.1|| Subunit of 20S proteasome; Pre3p |
|
|
tRNA Synthesis/Metabolism |
|||
|
a2b07ne |
3E-33 |
gi|1711623|sp|P40825|SYAC_YEAST ALANYL-TRNA SYNTHETASE |
|
|
810 |
1E-08 |
sp|O13651|SYIC_SCHPO ISOLEUCYL-TRNA SYNTHETASE |
|
|
1045 |
2E-25 |
dbj|BAA06688.1| (D31890) similar to lysyl tRNA synthetase |
|
|
330 |
2E-18 |
gi|3122655|sp|Q12211|PUS1_YEAST PSEUDOURIDYLATE SYNTHASE 1 |
|
|
1042 |
1E-61 |
pir||T38232 probable phenylalanyl-trna synthetase |
|
|
319 |
0.00001 |
ref|NP_011452.1|| pseudouridine synthase 2; Pus2p |
|
|
541 |
4E-26 |
pir||T40867 ASPARTYL-TRNA SYNTHETASE |
|
|
g9b12ne |
7E-20 |
sp|O13969|SYTM_SCHPO PROBABLE THREONYL-TRNA SYNTHETASE |
|
|
e2c07ne |
1E-79 |
sp|P28350|SYV_NEUCR VALYL-TRNA SYNTHETASE |
|
|
Translation Factors |
|||
|
1336 |
E-124 |
sp|Q01372|EF1A_NEUCR ELONGATION FACTOR 1-ALPHA |
|
|
21 |
4E-31 |
dbj|BAA11572.1| (D82574) elongation factor 1 beta |
|
|
757 |
1E-34 |
ef|NP_012842.1|| Translation elongation factor EF-1gamma; Tef4p |
|
|
883 |
8E-74 |
gb|AAF81925.1|AF107287_1 (AF107287) elongation factor 2 |
|
|
c2c02ne |
8E-09 |
sp|P25997|EF3_CANAL ELONGATION FACTOR 3 (EF-3) |
|
|
1314 |
6E-90 |
sp|P38672|IF5A_NEUCR INITIATION FACTOR 5A (EIF-5A) (EIF-4D) |
|
|
17 |
4E-17 |
gb|AAC39871.1| (AF038957) translation initiation factor 4e |
|
|
1351 |
7E-34 |
ref|NP_014155.1|| translation initiation factor 3 (eIF3) |
|
|
337 |
2E-28 |
sp|P47943|IF4A_SCHPO EUKARYOTIC INITIATION FACTOR 4A (EIF-4A) |
|
|
1168 |
7E-29 |
emb|CAA70166.1| (Y08969) Nascent polypeptide associated complex protein alpha subunit |
|
|
a4b11ne |
E-102 |
gb|AAC08410.1| (AF053983) translation release factor subunit 1 |
|
|
VII. RNA Synthesis |
|||
|
RNA Polymerases |
|||
|
1027 |
2E-16 |
gi|1710661|sp|P52435|RPBY_HUMAN DNA-DIRECTED RNA POLYMERASE II 13.3 KDA POLYPEPTIDE (RPB11) |
|
|
RNA Processing |
|||
|
890 |
9E-46 |
emb|CAB91372.1| (AL355930) related to snRNP protein SMX3 [Neurospora crassa] |
|
|
a7f11ne |
3E-10 |
gb|AAB72038.1| (U85207) snRNP core Sm protein homolog Sm-X5 |
|
|
602 |
1E-47 |
gi|2500534|sp|Q07478|HE47_YEAST PROBABLE ATP-DEPENDENT RNA HELICASE P47 HOMOLOG |
|
|
118 |
1E-39 |
pir||T38514 small nuclear ribonucleoprotein |
|
|
1110 |
1E-30 |
pir||T39362 U5 snRNP-like protein |
|
|
1370 |
1E-85 |
pir||T39724 probable pre-mrna splicing factor atp-dependent rna helicase |
|
|
921 |
6E-08 |
pir||T41178 splicing factor |
|
|
252 |
2E-58 |
ref|NP_014955.1|| 57 kDa nucleolar protein; Nop58p |
|
|
a7f08nm |
2E-26 |
ref|NP_036454.1|| U6 snRNA-associated Sm-like protein |
|
|
b8a09ne |
8E-15 |
ref|NP_058079.1|| Ser/Arg-related nuclear matrix protein |
|
|
b3d01ne |
7E-16 |
dbj|BAB03001.1| (AP001297) glycine-rich RNA binding protein-like |
|
|
Transcription Factors |
|||
|
376 |
3E-32 |
emb|CAB76217.1| (AL157991) potential transcriptional adaptor; similar to yeast ada2 |
|
|
1335 |
7E-95 |
emb|CAB91681.1| (AL356172) related to AP-1-like transcription factor [Neurospora crassa] |
|
|
1292 |
3E-07 |
gb|AAA86754.1| (U39049) Hmp1 |
|
|
972 |
5E-42 |
gb|AAC31206.1| (AF080600) homeodomain DNA-binding transcription factor |
|
|
116 |
4E-48 |
gb|AAD39161.1|AF142423_1 (AF142423) small zinc finger protein Tim8 [Neurospora crassa] |
|
|
385 |
1E-36 |
gb|AAF06076.1|AF151116_1 (AF151116) beta NAC homolog |
|
|
395 |
1E-06 |
pir||S78571 transcription factor HAC1 |
|
|
202 |
1E-11 |
pir||T39935 RNA binding protein |
|
|
d3b11ne |
1E-07 |
pir||T40539 zinc finger protein |
|
|
b2d12ne |
7E-32 |
pir||T40697 probable tata binding protein-interacting protein |
|
|
1343 |
3E-60 |
sp|P11115|CPC1_NEUCR CROSS-PATHWAY CONTROL PROTEIN 1 |
|
|
a9c03ne |
5E-11 |
sp|P49373|TFS2_SCHPO TRANSCRIPTION ELONGATION FACTOR |
|
|
b5c06ne |
1E-57 |
sp|P78706|RCO1_NEUCR TRANSCRIPTIONAL REPRESSOR RCO-1 |
|
|
170 |
8E-33 |
sp|P87000|AC15_NEUCR TRANSCRIPTIONAL ACTIVATOR PROTEIN ACU-15 |
|
|
730 |
6E-19 |
gb|AAD40003.1|AF150097_1 (AF150097) small zinc finger-like protein |
|
|
VIII. Unclassified |
|||
|
clock controlled genes (without known function, not including the newly identified ccgs) |
|||
|
1446 |
4E-32 |
sp|P22151| ccg-1 (glucose repressible gene grg-1) |
|
|
1447 |
7E-42 |
sp|Q04571| ccg-2 (hydrophobin precursor) |
|
|
1262 |
2E-42 |
gi|1184781| ccg-4 |
|
|
1435 |
2E-36 |
gi|3746899| ccg-6 |
|
|
1356 |
2E-81 |
gi|3746897| ccg-8 |
|
|
1358 |
3E-185 |
gi|3746895| ccg-9 |
|
|
others |
|||
|
162 |
5E-07 |
dbj|BAA86537.1| (AB033049) KIAA1223 protein [Homo sapiens] |
|
|
e3e12ne |
2E-11 |
dbj|BAA96543.1| (AB035593) p67-phox [Tursiops truncatus] |
|
|
67 |
3E-20 |
emb|CAA08813.1| (AJ009758) trk-1 [Neurospora crassa] |
|
|
d3g10ne |
2E-32 |
emb|CAB56701.1| (AJ249796) NIPSNAP1 protein [Danio rerio] |
|
|
b6b04ne |
6E-11 |
emb|CAB62571.1| (Y17330) SUAPRGA1 [Emericella nidulans] |
|
|
687 |
1E-14 |
emb|CAB91246.1| (AL355926) adrenoleukodystrophy related protein [Neurospora crassa] |
|
|
c4d05nm |
2E-82 |
emb|CAB91388.1| (AL355930) 7alpha-cephem-methoxylase P8 chain related protein [Neurospora crassa] |
|
|
195 |
2E-32 |
emb|CAB91673.1| (AL356172) related to SCP160 protein [Neurospora crassa] |
|
|
155 |
5E-74 |
emb|CAB99185.1| (AL390189) conserved hypothetical protein [Neurospora crassa] |
|
|
70 |
1E-10 |
gb|AAA29595.1| (L27591) erythrocyte membrane antigen 1 [Plasmodium chabaudi] |
|
|
1371 |
3E-56 |
gb|AAB53650.1| (U93506) symbiosis-related protein [Laccaria bicolor] |
|
|
1021 |
1E-10 |
gb|AAC26079.1| (AF013590) extragenic suppressor of the bimD6 mutation |
|
|
b4h07ne |
3E-59 |
gb|AAC27297.1| (AF069492) SONA [Aspergillus nidulans] |
|
|
924 |
1E-22 |
gb|AAC72940.1| (AF091071) Rer1 [Homo sapiens] |
|
|
1104 |
6E-13 |
gb|AAD34615.1|AF153283_1 (AF153283) putative progesterone-binding protein homolog |
|
|
328 |
7E-09 |
gb|AAD43994.1| (U59485) AttT [Agrobacterium tumefaciens] |
|
|
384 |
4E-22 |
gb|AAD44747.1|AF141323_18 (AF141323) IucB [Shigella flexneri] |
|
|
a9d08ne |
9E-72 |
gb|AAF08294.1|AF195874_1 (AF195874) heterokaryon incompatibility protein HET-C [Neurospora crassa] |
|
|
159 |
2E-49 |
gb|AAF13743.1|AF109921_1 (AF109921) caleosin [Sesamum indicum] |
|
|
33 |
8E-20 |
gb|AAF15069.1|AC011914_11 (AC011914) putative mutT protein [Arabidopsis thaliana] |
|
|
h5b05ne |
1E-17 |
gb|AAF51238.1| (AE003582) CG3214 gene product [Drosophila melanogaster] |
|
|
d5e10ne |
2E-12 |
gb|AAF54534.1| (AE003688) CG14688 gene product [Drosophila melanogaster] |
|
|
316 |
5E-12 |
gb|AAF67481.1|AF155662_1 (AF155662) putative 16.7 kDa protein [Homo sapiens] |
|
|
314 |
6E-31 |
gi|1723661|sp|P53224|ORM1_YEAST ORM1 PROTEIN |
|
|
745 |
5E-49 |
gi|549064|sp|P35691|TCTP_YEAST TRANSLATIONALLY CONTROLLED TUMOR PROTEIN HOMOLOG |
|
|
453 |
2E-18 |
gi|6016046|sp|O35943|FRDA_MOUSE FRATAXIN |
|
|
379 |
9E-18 |
gi|732206|sp|P40344|AUT1_YEAST AUTOPHAGOCYTOSIS PROTEIN |
|
|
565 |
1E-83 |
pir||A25784 hypothetical 70K protein - Neurospora crassa mitochondrion |
|
|
a5g09ne |
5E-17 |
pir||A70842 probable amiB protein - Mycobacterium tuberculosis |
|
|
780 |
9E-10 |
pir||C30208 hypothetical protein 2 (cpc-1 5' region) [Neurospora crassa] |
|
|
h1c10ne |
1E-10 |
pir||JC4750 gEgh 16 protein - grass mildew |
|
|
927 |
7E-57 |
pir||S04556 hypothetical protein L - Neurospora crassa mitochondrion |
|
|
381 |
4E-13 |
pir||S06607 23S rRNA intron 2 protein - Podospora anserina mitochondrion |
|
|
643 |
5E-51 |
pir||S59950 het-c2 protein - Podospora anserina |
|
|
1044 |
0.00002 |
pir||T15174 hypothetical protein C48E7.3 - Caenorhabditis elegans |
|
|
1061 |
6E-21 |
pir||T37500 vip1 protein - fission yeast |
|
|
610 |
1E-16 |
pir||T41619 hypothetical protein SPCC794.11c - fission yeast |
|
|
1411 |
9E-45 |
ref|NP_009634.1|| Homolog to sporulation specific protein SPS2 (S. cerevisiae) |
|
|
1245 |
8E-10 |
ref|NP_036030.1|| suppressor of Lec15 homolog |
|
|
814 |
2E-15 |
ref|NP_037439.1|| non-functional folate binding protein |
|
|
1136 |
1E-50 |
ref|NP_057128.1|| CGI-105 protein |
|
|
1421 |
7E-39 |
sp|O74238|SNP1_PHANO PROTEIN SNODPROT1 PRECURSOR |
|
|
540 |
7E-42 |
sp|P10169|CON8_NEUCR CONIDIATION-SPECIFIC PROTEIN 8 |
|
|
1116 |
2E-24 |
sp|P10713|CONX_NEUCR CONIDIATION-SPECIFIC PROTEIN 10 |
|
|
1098 |
1E-48 |
sp|P34762|CON6_NEUCR CONIDIATION-SPECIFIC PROTEIN 6 |
|
|
715 |
2E-34 |
sp|P38093|FLBA_EMENI DEVELOPMENTAL REGULATOR FLBA |
|
|
b5d02nm |
7E-35 |
sp|P56092|EPD1_CANMA EPD1 PROTEIN PRECURSOR (ESSENTIAL FOR PSEUDOHYPHAL DEVELOPMENT 1) |
|
|
1121 |
4E-70 |
sp|P77243|PRPD_ECOLI PRPD PROTEIN |
|
|
19 |
7E-08 |
sp|Q09711|NCS1_SCHPO HYPOTHETICAL CALCIUM-BINDING PROTEIN |
|
|
1434 |
7E-28 |
sp|Q09912|PSI_SCHPO PSI PROTEIN |
|
|
1380 |
E-13 |
||T08877 Modin - Podospora anserina |
|
a
A single clone or contig ID is given in those cases in which several clones or contigs have homology to the same gene. This can happen in cases when one contig corresponds to the 5 end and one to the 3 end of a given gene. The clone or contig given is the one with the best P/E value. A complete list of contigs corresponding to a single gene can be found in an extended version of this table on our web page.