Wed Aug 8 10:33:07 CDT 2012
Clone Clone Primary Genbank Level Phrap Phrap Phrap Phrap Consed_Err Latest Map Organism Major
Current/Original Accession Size Ctgs Fold Base Per 10KB Submission
Type Name Researcher Number Hi Hi(Lo) Cover Qual Hi ( Lo ) Reads Date Location Collaborator
======= ============= ======================== ========= ===== ======== ====== ===== ===== ============ ===== ========== ======== ============ =============
Cosmid sw06e08 Doris M. Kupfer AC000133 3 38807 1 (0) -( -) - - Emericella nidulans (Aspergillus nidulans) -
Cosmid 30b1 Jennifer Hausner AC004395 3 37323 1 (1) 5.4 79.1 0.22( 0.21) 470 1998-11-26 VIII Emericella nidulans Keller,N.
cosmid 2h2 Doris Kupfer AC005299 3 40563 1 (1) 5.9 84.3 0.01(89.64) 605 1998-10-23 viii Emericella nidulans Keller,N.
Cosmid ap0 Jennifer Lewis AC005991 3 37754 1 (1) 6.2 81.1 0.27( 0.27) 447 2003-03-11 - Aspergillus parasiticus Keller,N.
Cosmid nc14 Hua Zhu AC007959 2 38865 3 (3) 8.2 82.1 294.65(215.47) 808 2010-09-17 - Neurospora crassa Aramayo,R.
Cosmid nc17 Hua Zhu AC007960 2 39847 3 (3) 8.5 82.9 768.07(554.93) 995 2010-09-17 - Neurospora crassa Aramayo,R.
Cosmid nc19 Doris Kupfer/Sara Downar AC025046 2 32441 2 (2) 5.2 77.1 0.7(115.83) 1289 2010-09-17 - Neurospora crassa Aramayo,R.
cosmid af-5e6 Doris Kupfer AC091253 2 36835 2 (2) 13.9 87.2 237.23(1382.41) 2307 2010-09-17 IV Aspergillus flavus Payne,G.
cosmid af-30e1 Doris Kupfer AC087725 3 41361 1 (1) 8.3 83.8 0.06( 0.05) 871 2010-09-17 - Aspergillus flavus Payne,G.
BAC uhobac-2b7 Doris Kupfer / Sunkyoung AC114900 3 100829 1 (1) 9.9 86.0 0.45( 0.42) 1733 2010-09-17 - Ustilago hordei Kronstad,J.
BAC uhobac-1c16 Jiaxi Quan/Doris Kupfer AC114898 2 152790 4 (2) 9.6 85.9 910(629.95) 2917 2010-09-17 - Ustilago hordei Kronstad,J.
BAC uhobac-4k21 Sulan Qi AC116560 3 100958 1 (1) 16.4 89.1 0.02( 0.02) 2867 2010-09-17 - Ustilago hordei Kronstad,J.
BAC uhobac-1n1 Doris Kupfer AC114899 3 100185 1 (1) 9.3 85.1 0.04( 0.04) 1476 2010-09-17 - Ustilago hordei Kronstad,J.
BAC uhobac-5d9 Doris Kupfer / Limei Yan AC119572 3 152059 1 (1) 8.1 86.3 0.78( 8.42) 1966 2010-09-17 - Ustilago hordei Kronstad,J.
Mito mit-1 Jami E. Milam AC024175 3 16596 1 (1) 15.2 87.1 0.01( 0.01) 829 2003-03-11 - Danio rerio Broughton,R.E.
cosmid pyj7 Doris Kupfer AC007872 3 33952 1 (1) 5.9 81.9 0.02( 0.02) 798 2003-03-11 - Aspergillus parasiticus Keller,N.
Cosmid cos3b Fares Z. Najar AC004396 2 43782 2 (2) 8.5 84.0 303.99(673.45) 2404 2002-03-29 Genomic Pseudomonas sp. Hester,K.
cosmid cos36 Sandra W. Clifton AC000108 3 38570 1 (1) 9.2 75.8 0.9( 0.83) 1116 2003-03-11 - Helicobacter pylori Akopyants,N.S.
BAC sabac-1 HongGui Jia AC074316 3 56268 1 (1) 9.9 83.2 0.53( 0.49) 1134 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-4 Shaoping Lin AC069311 3 17593 1 (1) 12.0 78.0 0.03( 0.03) 469 2002-03-27 - staphylococcus aureus Iandolo,J.
BAC sabac-7 HongGui Jia AC078935 3 53354 1 (1) 10.3 84.4 0.15( 0.15) 871 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-9 Phoebe Loh/Sulan Qi AC027138 3 46239 1 (1) 5.7 80.6 0.77( 0.69) 905 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-11 HongGui Jia AC078934 3 55390 1 (1) 10.0 84.1 0.08( 0.08) 963 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-16 Shaoping Lin AC074026 3 52695 1 (1) 6.4 77.7 0.57( 0.57) 834 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-32 Shaoping Lin AC025951 3 22158 1 (1) 11.5 72.8 0.65( 0.65) 491 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-41 Shaoping Lin AC074320 3 49479 1 (1) 5.8 75.5 0.64( 0.62) 686 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-43 Phoebe Loh/Sulan Qi AC025592 3 55389 1 (1) 5.7 83.2 0.14( 0.14) 626 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-47 Phoebe Loh/Sulan Qi AC069081 3 43986 1 (1) 6.9 77.5 10.46(10.46) 627 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-57 RunYing Tian AC090969 3 40520 1 (1) 5.1 77.4 0.65( 0.65) 305 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-101 Phoebe Loh/Sulan Qi AC025948 3 50152 1 (1) 5.3 78.1 1.41( 1.37) 798 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-103 RunYing Tian AC074317 3 37669 1 (1) 7.9 80.7 0.79( 0.79) 547 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-106 Phoebe Loh/Sulan Qi AC027136 3 49898 1 (1) 5.8 79.3 0.54( 0.64) 637 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-108 RunYing Tian AC074318 3 51691 1 (1) 10.8 84.6 0.39( 1.41) 974 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-114 Phoebe Loh/Sulan Qi AC025949 3 28142 1 (1) 12.3 87.7 0.05( 0.05) 598 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-115 YuDong Qian AC078830 3 44051 1 (1) 8.6 81.9 0.31( 0.31) 717 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-123 Phoebe Loh/Sulan Qi AC027137 3 49643 1 (1) 8.3 81.3 0.26( 0.25) 763 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-124 Yudong Qian AC078831 3 30501 1 (1) 8.7 84.1 0.02( 0.02) 543 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-125 RunYing Tian AC090967 3 27650 1 (1) 14.0 85.8 0.22( 0.22) 723 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-126 RunYing Tian AC090968 3 39425 1 (1) 4.6 70.5 0.83( 0.83) 333 2002-03-27 - Staphylococcus aureus Iandolo,J.
BAC sabac-130 Phoebe Loh/Sulan Qi AC025950 3 49336 1 (1) 7.2 78.5 0.99( 0.95) 641 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-134 Phoebe Loh/Sulan Qi AC025591 3 58431 1 (1) 8.6 81.8 0.57( 0.57) 892 2003-03-11 - Staphylococcus aureus Iandolo,J.
BAC sabac-135 YuDong Qian AC078832 3 44901 1 (1) 8.7 80.6 0.63( 0.63) 719 2003-03-11 - Staphylococcus aureus Iandolo,J.
WGS ap1 Fares Najar/Shaoping Lin auto_ap1 1 2318814 1 (125) 13.7 80.0 1.33(438.93) 37715 - - A Project #1 -
WGS ap5 Baifang Qin auto_ap5 1 2284943 1 (83) 11.9 81.1 0.77(217.51) 28279 - - A Project #5 -
WGS ap7 Fares Najar/Shaoping Lin auto_ap7 1 2308833 5 (188) 11.5 79.0 5.94(321.48) 28447 - - A Project #7 -
WGS smed Ruihua Shi auto_smed 1 6972560 9 (9) 10.5 88.0 0.69( 5.1) 118558 - - Sinorhizobium meidicae -
WGS azor Doris Kupfer, Graham Wil auto_azor 1 1509618 527 (667) 2.8 78.1 1604.84(1515.68) 21319 - - Azorhizobium caulinodans Holsters,M.
WGS lepp Jiaxin Qu auto_lepp 1 4713363 72 (8) 14.5 88.1 23.57(57.07) 104179 - - Leptospira interrogans -
WGS grip Jiaxin Qu auto_grip 1 4499130 62 (0) 13.7 89.2 9.84( -) 165628 - - Leptospira kirschneri -
WGS sp2 Baifang Qin/Honggui Jia/ auto_sp2 1 1814026 1 (1) 8.4 82.0 3.42(28.01) 23898 - - Streptococcus pyogenes Ferretti,J.
WGS ef Simone Macmil auto_ef 1 22851564 2225 (73) 3.4 27.5 691.66(3050.34) 53756 - - Epichloe festucae -
WGS crr Simone Macmil auto_crr 1 2988361 1114 (0) 2.1 83.6 1623.15( -) 223579 - - Phymatotrichopsis omnivora Marek,S.
EST crrest Simone Macmil auto_crrest 1 0 0 (0) -( -) - - Phymatotrichopsis omnivora Marek,S.
EST crrest-a Simone Macmil auto_crr 1 0 0 (0) -( -) - - Phymatotrichopsis omnivora Marek,S.
EST crrest-b Simone Macmil auto_crr 1 0 0 (0) -( -) - - Phymatotrichopsis omnivora Marek,S.
EST crrest-c Simone Macmil - 1 0 0 (0) 5.6 31.1 -( -) 1965 - - Phymatotrichopsis omnivora Marek,S.
EST crrest-d Simone Macmil - 1 0 0 (0) 3.9 44.7 -( -) 2865 - - Phymatotrichopsis omnivora Marek,S.
EST crrest-e Simone Macmil - 1 0 0 (0) 3.1 28.4 -( -) 2076 - - Phymatotrichopsis omnivora Marek,S.
EST crrest-1 Simone Macmil auto_crrest-1 1 0 0 (0) 3.2 58.2 -( -) 75670 - - Phymatotrichopsis omnivora Marek,S.
EST crrest-pool2 Simone Macmil auto_crrest-pool2 1 0 0 (0) 5.5 48.4 -( -) 14063 - - Phymatotrichopsis omnivora Marek,S.
EST crrest-pool3 Simone Macmil auto_crrest-pool3 1 0 0 (0) 6.5 50.3 -( -) 42177 - - Phymatotrichopsis omnivora Marek,S.
EST crrest-4 Simone Macmil auto_crrest-4 1 0 0 (0) 8.8 55.4 -( -) 41743 - - Phymatotrichopsis omnivora Marek,S.
EST crrest-pool5 Simone Macmil auto_crrest-pool5 1 0 0 (0) 9.8 54.8 -( -) 61226 - - Phymatotrichopsis omnivora Marek,S.
EST crrest-6 Simone Macmil auto_crrest-6 1 0 0 (0) 7.0 57.2 -( -) 61702 - - Phymatotrichopsis omnivora Marek,S.
EST crrest-all Simone Macmil auto_crrest-all 1 0 0 (0) 2.6 33.4 -( -) 6673 - - Phymatotrichopsis omnivora Marek,S.
BAC sk4a Baifang Qin AC149125 3 5719 1 (1) 8.7 87.1 0.01( 0.01) 113 2010-09-17 - Spiroplasma kunkelii Davis,R.E.
WGS da Fares Najar/Chunmei Qu/P auto_da 1 3245696 224 (233) 2.8 51.1 149.98( -) 21550 - - Desulfogleba alkanexedens Suflita,J.
WGS ecoli_edl Fares Najar auto_ecoli_edl 1 4815317 133 (163) 0.8 31.5 298.17(59.94) 1231 - - E. coli Conway,T.
WGS ecoli_sk Fares Najar auto_ecoli_sk 1 5394182 78 (80) 2.8 35.6 69.29(95.08) 934 - - E. coli Conway,T.
WGS h8_phage Graham Wiley AC171169 2 104372 1 (1) 15.8 79.1 82.04(285.46) 4087 2010-09-17 - Bacteriophage H8 Klebba,P.
WGS Mimiviridae1 Ruihua Shi auto_Mimiviridae1 1 1355188 16 (16) 4.0 34.7 25.74(77.96) 13224 - - sea Mimiviridae1 -
- JMC - - 1 0 0 (0) -( -) - - - -
- C_zeina - - 1 3155257 788 (875) 2.9 41.1 615.65(612.01) 147523 - - - -
Fosmid fosu1 Liping Zhou AC148074 3 37026 1 (1) 13.3 85.8 0.13(138.45) 748 2010-09-17 - Serratia marcescens Fletcher,J.
Fosmid fosu2 Liping Zhou AC148075 3 35399 1 (1) 13.8 88.5 0.05(138.91) 936 2010-09-17 - Serratia marcescens Fletcher,J.
Fosmid zdt-44a23 Chunmei Qu/Honggui Jia/L AC149043 3 35946 1 (1) 9.9 87.6 0.01( 0.01) 1062 2010-09-17 - uncultured bacterium zdt-44a23 Elshahed,M.
Fosmid zdt-14e13 Chunmei Qu/Honggui Jia/L AC150249 3 40893 1 (1) 7.4 80.5 0.65( 0.64) 1117 2010-09-17 - uncultured bacterium zdt-14e13 Elshahed,M.
Fosmid zdt-25h12 Chunmei Qu/Honggui Jia/L AC150250 3 41495 1 (1) 7.9 82.1 0.6( 0.57) 993 2010-09-17 - uncultured bacterium zdt-25h12 Elshahed,M.
Fosmid zdt-33i5 Chunmei Qu/Honggui Jia/L AC150251 3 36957 1 (1) 17.6 85.9 0.76( 0.76) 1268 2010-09-17 - uncultured bacterium zdt-33i5 Elshahed,M.
Fosmid zdt-45e5 Chunmei Qu/Honggui Jia/L AC160099 3 35742 1 (1) 14.3 86.5 0.76( 0.76) 1348 2010-09-17 - uncultured bacterium zdt-45e5 Elshahed,M.
Fosmid zdt-9n2 Chunmei Qu/Honggui Jia/L AC150248 3 36828 1 (1) 9.2 82.9 0.41( 0.42) 1042 2010-09-17 - uncultured bacterium zdt-9n2 Elshahed,M.
Fosmid zdt-48a5 Chunmei Qu/Honggui Jia/L AC150252 3 38838 1 (1) 8.6 86.9 0.23(110.74) 1017 2010-09-17 - uncultured bacterium zdt-48a5 Elshahed,M.
Fosmid zdt-25h14 Honggui Jia AC160630 3 37210 1 (1) 11.5 88.2 0.03( 0.03) 844 2010-09-17 - uncultured bacterium zdt-25h14 Elshahed,M.
Fosmid zdt-39a1 Jiaxi Quan/Chunmei Qu/Ho AC160631 3 34608 1 (1) 10.2 79.4 0.69(222.46) 952 2010-09-17 - uncultured bacterium zdt-39a1 Elshahed,M.
EST rumen64 Leonid Sukharnikov - 1 5574 2 (2) 2.1 16.3 1481.29(1497.7) 578 - - EST from the rumen of high-grain fed -
EST rumen69 Leonid Sukharnikov - 1 0 0 (1) 2.4 31.0 -(1107.39) 2134 - - Bacterial ESTs from the rumen of prairie Hay-fed cattle -
Bacterial halo Fares Najar - 1 4813043 415 (414) 6.8 43.3 89.35(86.79) 10584 - - Halophile unknown -
454 teq Chunmei Qu/ Ping Wang /Y - 1 2120592 33 (33) 16.2 30.0 186.49(184.35) 3495 - - Taylorella equigenitalis -
454 daf Chunmei Qu/ Ping Wang /Y - 1 3702596 585 (584) 2.6 35.3 256.7(253.55) 12219 - - Desulfovibrio africanus -
454 dde Chunmei Qu/Ping Wang/Yan - 1 3648928 413 (401) 2.6 39.0 148.42(145.72) 5871 - - Desulfovibrio desulfuricans -
Genomic smutans_af Shaoping Lin auto_smutans_af 1 2010543 4 (9) 3.9 38.7 38.33(95.34) 10270 - - Streptococcus mutans Ferretti,J.
Genomic smutans_19 Shaoping Lin auto_smutans_19 1 1972500 2 (8) 4.4 47.4 3.88(87.66) 5868 - - Streptococcus mutans Ferretti,J.
Genomic smutans_wt Shaoping Lin auto_smutans_wt 1 1963988 23 (39) 3.4 42.0 27.02(29.44) 4558 - - Streptococcus mutans Ferretti,J.
Genomic smutans_ua Shaoping Lin auto_smutans_ua 1 2012479 9 (15) 3.3 35.1 19.2(49.34) 8864 - - Streptococcus mutans Ferretti,J.
Genomic soligofermentas Graham Wiley, Simone Mac - 1 2105327 103 (100) 8.3 42.1 156.35(147.39) 10061 - - Streptococcus oligofermentans Dong,X.
Bacterial vatypica Simone Macmil, Graham Wi auto_vatypica 1 2903726 134 (149) 4.6 40.6 745.95(696.11) 23679 - - Veillonella atypica, Gram+ bacteria Qi,F.
Genomic xanth Graham Wiley, Ying Fu auto_xanth 1 4764522 186 (185) 11.4 44.9 128.3(129.92) 20534 - - Xanthomonas_campestris -
- cev - - 1 482249 8 (14) 8.7 63.1 6.61( 67.2) 5723 - - - -
Genomic hav Simone Macmil, Graham Wi auto_hav 1 256018 14 (13) 3.7 33.2 1190.32(1190.49) 5229 - - Virus -
Genomic hcv Simone Macmil, Graham Wi auto_hcv 1 24522 10 (11) 2.6 13.2 1502.27(1475.18) 35133 - - Virus -
WGS rn1 Simone Macmil - 1 0 0 (0) 2.3 26.7 -( -) 6445 - - Reniform nematode -
WGS rn2 Simone Macmil - 1 2199455 717 (731) 3.3 31.6 1695.3(1590.27) 110513 - - Reniform nematode -
EST rnest3 Simone Macmil - 1 0 0 (0) 2.7 35.6 -( -) 3683 - - Reniform nematode -
EST rnest4 Simone Macmil - 1 0 0 (0) 3.3 41.9 -( -) 274 - - Reniform nematode -
- cgroot - - 1 2013 1 (1) 2.0 11.4 3224.22(3176.41) 6620 - - - -
- cgleaf - - 1 2527 1 (1) 2.4 37.4 2550.03(2530.12) 10209 - - - -
EST hfegg Fares Z. Najar auto_hfegg 1 21652 8 (8) 2.5 30.1 1171.92(1193.59) 5974 - - HornFly egg Zou,Z.
EST hffemale Fares Z. Najar auto_hffemale 1 76834 28 (28) 2.5 35.4 2480.84(2474.24) 17542 - - Horn fly - female Zou,Z.
EST hflarvae Fares Z. Najar auto_hflarvae 1 30907 10 (10) 2.0 25.9 2421.87(2402.82) 3773 - - Horn fly - Larvae Zou,Z.
EST hfmale Fares Z. Najar auto_hfmale 1 0 0 (5) 2.7 19.8 -(2512.86) 2956 - - Horn fly - male Zou,Z.
EST swegg Yanbo Xing, Chunmei Qu auto_swegg 1 65860 25 (26) 2.4 18.8 2110.47(2099.74) 11041 - - Screwworm egg Guerrero,F.
EST swfemale Yanbo Xing, Chunmei Qu auto_swfemale 1 53524 19 (21) 2.5 25.8 2208.35(2197.97) 9071 - - Screwworm female Guerrero,F.
EST swlarvae Yanbo Xing, Chunmei Qu auato_swlarve 1 48325 17 (17) 2.5 34.7 1831.82( 1827) 8834 - - Screwworm laravae Guerrero,F.
EST swmale Yanbo Xing, Chunmei Qu auto_swmale 1 51435 19 (19) 2.4 26.7 2106.92(2099.51) 14448 - - Screwworm male Guerreo,F.
rRNA lewispool2 Chunmei Qu auto_lewispool2 1 18997 5 (5) 2.9 39.8 153.91(153.91) 57 - - Community rRNA from an ancient caprolite Lewis,C.
rRNA lewispool3 Chunmei Qu auto_lewispool3 1 8854 2 (2) 3.1 30.5 315.09(315.09) 62 - - Community rRNA from an ancient caprolite Lewis,C.
Genomic spyogenes_c770 Shaoping Lin spyogenes_c770 1 1477318 312 (308) 3.1 36.4 338.64(337.17) 6126 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_f380 Shaoping Lin spyogenes_f380 1 1115859 300 (302) 2.7 48.2 674.23(664.92) 7780 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_j138a Shaoping Lin auto_spyogenes_j138a 1 1206261 309 (310) 2.9 33.9 508.66(502.18) 6894 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_j138b Shaoping Lin auto_spyogenes_j138b 1 1458263 283 (277) 3.6 30.7 303.3(300.89) 6498 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_31rs67 Shaoping Lin auto_spyogenes_31rs67 1 77001 28 (28) 2.4 33.2 1434.12(1427.89) 9308 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_b270 Shaoping Lin auto_spyogenes_b270 1 1722215 249 (251) 5.0 38.4 176.5(177.19) 8086 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_b862 Shaoping Lin auto_spyogenes_b862 1 1611351 205 (202) 4.5 33.5 162.16(162.54) 5472 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_c580 Shaoping Lin auto_spyogenes_c580 1 1233048 278 (279) 2.8 30.9 535.5(534.78) 7661 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_d710 Shaoping Lin auto_spyogenes_d710 1 454714 162 (168) 2.4 20.3 1020.55(1019.96) 8290 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_f374 Shaoping Lin auto_spyogenes_f374 1 509934 176 (177) 2.4 19.3 965.22(969.09) 8082 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_f375 Shaoping Lin auto_spyogenes_f375 1 470272 161 (164) 2.3 31.0 1049.62(1048.65) 8240 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_b878 Shaoping Lin auto_spyogenes_b878 1 806397 255 (256) 2.5 41.5 808.63(801.93) 7360 - - Streptococcus pyogenes McShaw,M.
Genomix spyogenes_f741 Shaoping Lin auto_spyogenes_f741 1 601374 192 (196) 2.4 23.0 893.64(885.25) 7657 - - Streptococcus pyogenes -
Genomic spyogenes_a744 Shaoping Lin spyogenes_a744 1 1238044 304 (302) 2.6 30.4 548.42(548.96) 5962 - - Streptococcus pyogenes McShaw,M.
Genomic spyogenes_d754 Shaoping Lin auto_spyogenes_d754 1 387884 133 (135) 2.4 25.8 1116.24(1120.79) 8719 - - Streptococcus pyogenes -
Genomic spyogenes_d402 Shaoping Lin auto_spyogenes_d402 1 23404 9 (9) 2.4 22.8 1637.09(1626.81) 8707 - - Streptococcus pyogenes McShaw,M.
Genomic haloferax Simone Macmil, Graham Wi auto_Haloferax 1 4799044 31 (31) 11.8 37.3 80.24(80.34) 10833 - - Haloferax Xiang,H.
genomic marinebact Graham Wiley marinebact 1 1660311 515 (516) 2.6 30.2 790.79(793.08) 16298 - - Marine bacterium -
Genomic bisulfitedna Simone Macmil - Ensembl 1 3352 1 (3) 2.5 39.3 682.18(642.81) 23011 - - Homo sapiens Shi,H.
- tick - - 1 64219 21 (21) 2.5 68.8 2643.29(2624.93) 24289 - - - -
- leo1 - - 1 0 0 (0) -( -) - - - -
- leo2 - - 1 0 0 (0) -( -) - - - -
- 8a_825b - - 1 0 0 (0) 3.3 22.1 -( -) 360 - - - -
- 8b_805a - - 1 0 0 (0) 2.3 22.8 -( -) 72 - - - -
- p1ac - - 1 0 0 (0) 2.1 18.1 -( -) 88 - - - -
- p1aw - - 1 0 0 (0) -( -) - - - -
- p5ac - - 1 0 0 (0) 0.0 0.0 -( -) 3 - - - -
- p5aw - - 1 0 0 (0) 2.4 18.5 -( -) 116 - - - -
- pkfs - - 1 0 0 (0) 2.3 17.9 -( -) 39 - - - -
- n6 - - 1 0 0 (0) 6.2 44.9 -( -) 12058 - - - -
- epimedium - - 1 17574 8 (9) 2.7 52.3 1843.02(1810.78) 29888 - - - -
- lycium - - 1 22771 10 (11) 2.6 45.6 1839.19(1784.76) 51955 - - - -
- gq28 - - 1 0 0 (0) 2.4 21.7 -( -) 7979 - - - -
- gq31 - - 1 0 0 (0) 2.3 14.9 -( -) 11109 - - - -
- gq32 - - 1 0 0 (0) 2.4 17.0 -( -) 11654 - - - -
- gq33 - - 1 0 0 (0) 2.3 23.4 -( -) 5274 - - - -
- scbh1 - - 1 583732 75 (74) 3.7 31.7 289.12(281.5) 3509 - - - -
- scbh2 - - 1 615945 48 (41) 5.5 32.3 395.05(398.64) 3956 - - - -
- scbh3 - - 1 527496 62 (59) 4.6 27.3 223.46(214.26) 1906 - - - -
- scbh4 - - 1 37779 15 (16) 1.9 21.9 1764.73(1745.52) 2819 - - - -
- scbv1 - - 1 459074 41 (42) 3.6 36.0 178.68(193.11) 2904 - - - -
- scbv2 - - 1 404308 31 (31) 5.0 35.0 387.52(383.57) 3028 - - - -
- scbv3 - - 1 401683 59 (57) 3.5 31.5 644.09(625.42) 3124 - - - -
- scbv4 - - 1 584664 25 (25) 6.3 34.8 476.56(486.94) 4616 - - - -
- scbv5 - - 1 515357 38 (37) 8.2 44.3 259.76(259.14) 3496 - - - -
BAC shcr-100b23 Simone Macmil FJ348719 1 176450 16 (16) 8.3 41.7 88.97(78.93) 597 - - Saccharum officinarum Ming,R.
BAC shcr-43o10 Simone Macmil - 1 137189 7 (7) 9.8 41.4 35.16( 34.4) 631 - - Saccharum officinarum Ming,R.
BAC shcr-79a20 Simone Macmil FJ348718 1 94015 8 (8) 8.5 44.7 35.08(30.99) 521 - - Saccharum officinarum Ming,R.
BAC shcr-43h1 Simone Macmil FJ348715 1 340633 9 (9) 6.4 40.1 142.56(142.56) 524 - - Saccharum officinarum Ming,R.
BAC shcr-40e22 Simone Macmil FJ348716 1 154465 14 (14) 8.3 46.3 674.48(663.98) 896 - - Saccharum officinarum Ming,R.
BAC shcr-110m4 Simone Macmil FJ348723 1 146362 11 (11) 11.0 43.7 26.96(27.83) 752 - - Saccharum officinarum Ming,R.
BAC shcr-108j8 Simone Macmil FJ348721 1 111144 7 (6) 7.9 34.8 26.98(19.31) 851 - - Saccharum officinarum Ming,R.
BAC shcr-109d21 Simone Macmil FJ348722 1 128558 7 (6) 9.4 43.9 11.68(13.17) 770 - - Saccharum officinarum Ming,R.
BAC shcr-19d20 Simone Macmil - 1 196431 1 (1) 15.6 34.3 63.77(63.52) 358 - - Saccharum officinarum Ming,R.
BAC shcr-104n3 Simone Macmil FJ348720 1 302441 6 (7) 13.1 46.0 45.13(47.96) 1135 - - Saccharum officinarum Ming,R.
BAC shcr-126g4 Simone Macmil FJ348725 1 84840 6 (6) 12.4 41.9 22.35( 20.7) 303 - - Saccharum officinarum Ming,R.
BAC shcr-118l15 Simone Macmil FJ348724 1 97777 5 (5) 8.1 44.4 25.76( 25.7) 530 - - Saccharum officinarum Ming,R.
BAC shcr-159c20 Simone Macmil FJ348726 1 125359 11 (10) 8.6 36.3 50.43(42.53) 565 - - Saccharum officinarum Ming,R.
BAC shcr-150m18 Simone Macmil FJ348733 1 128096 2 (2) 11.5 44.2 6.6( 6.6) 538 - - Saccharum officinarum Ming,R.
BAC shcr-165p20 Simone Macmil FJ348727 1 112174 7 (6) 10.0 40.2 53.64( 9.49) 567 - - Saccharum officinarum Ming,R.
BAC shcr-204d12 Simone Macmil FJ348731 1 96107 4 (5) 4.4 38.8 37.37( 36.4) 456 - - Saccharum officinarum Ming,R.
BAC shcr-215o2 Simone Macmil FJ348732 1 78155 8 (8) 3.7 39.0 58.77(89.05) 504 - - Saccharum officinarum Ming,R.
BAC shcr-175o7 Simone Macmil FJ348729 1 78889 20 (17) 2.9 27.7 286.13( 271) 596 - - Saccharum officinarum Ming,R.
BAC shcr-187j16 Simone Macmil FJ348730 1 119283 10 (10) 4.0 32.4 50.59(50.56) 691 - - Saccharum officinarum Ming,R.
BAC shcr-172l1 Simone Macmil FJ348728 1 93934 5 (5) 4.7 45.0 8.75(206.99) 622 - - Saccharum officinarum Ming,R.
- cotp1 - - 1 225092 8 (7) 4.2 71.1 410.41(975.97) 3946 - - - -
- cotp1test - - 1 216375 16 (13) 2.2 34.1 141.23(146.63) 804 - - - -
- cotp2 - - 1 260207 5 (5) 5.7 76.7 214.35(604.18) 4132 - - - -
- cotp3 - - 1 183201 18 (18) 5.4 83.0 916.97(1292.45) 5049 - - - -
- cotp4 - - 1 184803 4 (4) 6.2 80.3 367.47(763.51) 4564 - - - -
- cotp5 - - 1 145309 19 (19) 3.7 78.1 1156.86(1200.59) 3895 - - - -
- cotp123 - - 1 440293 22 (25) 5.6 82.0 940.47(1584.8) 10857 - - - -
- cotp45 - - 1 253776 8 (8) 6.0 85.2 725.17(1220.07) 6732 - - - -
BAC cbv-101n18 Simone Macmil AC245509 1 117218 2 (2) 1.2 26.2 268.82(268.53) 773 2011-08-17 - Gossypium hirsutum -
WGS cbv-102m21 Simone Macmil AC245508 1 119526 3 (3) 2.5 46.8 205.55(515.33) 780 2011-08-17 - Gossypium hirsutum -
BAC cbv-103a21 Simone Macmil AC245640 1 117222 2 (2) 1.2 47.4 128.78(432.01) 775 2011-08-25 - Gossypium hirsutum -
BAC cbv-103i14 Simone Macmil AC245648 1 207632 5 (5) 1.3 41.2 295.55(366.89) 783 2011-08-25 - Gossypium hirsutum -
BAC cbv-103l18 Simone Macmil AC245652 1 85057 14 (14) 2.7 45.4 295.17(918.61) 805 2011-08-25 - Gossypium hirsutum -
BAC cbv-123k05 Simone Macmil - 1 0 0 (1) 1.6 38.4 -(5297.93) 774 - - Gossypium hirsutum -
BAC cbv-133f04 Simone Macmil AC245642 1 202643 4 (5) 1.2 28.2 329.91(465.7) 782 2011-08-25 - Gossypium hirsutum -
BAC cbv-155k01 Simone Macmil AC245653 1 234729 4 (21) 1.0 38.7 295.4(1516.68) 776 2011-08-25 - Gossypium hirsutum -
BAC cbv-15c19 Simone Macmil AC245645 1 119905 2 (4) 2.2 41.4 176.5(650.04) 766 2011-08-25 - Gossypium hirsutum -
BAC cbv-165g03 Simone Macmil AC245655 1 186779 3 (5) 1.3 25.9 244.82(431.82) 775 2011-08-25 - Gossypium hirsutum -
BAC cbv-176f03 Simone Macmil AC245646 1 137056 8 (9) 2.7 72.1 175.36(747.47) 1546 2011-08-25 - Gossypium hirsutum -
BAC cbv-188k21 Simone Macmil AC245644 1 121992 2 (2) 3.3 54.8 122.12(584.99) 773 2011-08-25 - Gossypium hirsutum -
BAC cbv-198m14 Simone Macmil AC245641 1 101454 7 (8) 3.2 57.4 167.75(386.55) 778 2011-08-25 - Gossypium hirsutum -
BAC cbv-31n01 Simone Macmil AC245647 1 108679 1 (1) 3.4 63.8 74.43(1106.86) 1447 2011-08-25 - Gossypium hirsutum -
BAC cbv-4p17 Simone Macmil AC245643 1 113208 2 (2) 3.9 72.8 57.03(276.55) 771 2011-08-25 - Gossypium hirsutum -
BAC cbv-56o13 Simone Macmil AC245649 1 164068 4 (4) 4.7 58.9 179.65(202.81) 771 2011-08-25 - Gossypium hirsutum -
BAC cbv-64m05 Simone Macmil AC245654 1 185261 2 (3) 0.8 45.0 216.9(416.85) 779 2011-08-25 - Gossypium hirsutum -
BAC cbv-6g16 Simone Macmil AC245651 1 116173 14 (18) 2.1 31.5 337.8(758.77) 784 2011-08-25 - Gossypium hirsutum -
BAC cbv-76h08 Simone Macmil AC245650 1 112118 4 (5) 1.2 46.7 206.35(358.31) 778 2011-08-25 - Gossypium hirsutum -
- prv1 - - 1 0 0 (0) 2.0 16.2 -( -) 27865 - - - -
- nmva - - 1 30586 13 (16) 2.4 26.8 2040.77(1995.79) 52028 - - - -
- nc12c - - 1 2043 1 (6) 2.4 26.8 2222.05(2171.45) 54961 - - - -
phase1=137979197 phase2=448932 phase3=2210179 total=140638308
Bruce Roe, broe@ou.edu