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Introduction

The template display plots information contained within a single contig. This information includes readings, templates, tags, restriction enzyme sites and quality calculations. In the figure below all of these information types can be seen.

[picture]
(Click for full size image)

The large top section contains the readings shown as short arrowed lines, and the templates shown as longer (mostly blue) lines. Beneath this is the quality plot. Beneath that is the restriction enzyme plot. At the bottom is the ruler. The coloured blocks immediately above and below the ruler are tags. These tags can also be seen on their corresponding readings in the large top section. As with many other displays, the usual zooming mechanism is available.


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This page is maintained by James Bonfield. Last generated on 29 April 1996.
URL: http://www.mrc-lmb.cam.ac.uk/pubseq/manual/gap4_66.html