Solanum lycopersicum Sequencing Progress



Sun Nov 22 09:39:49 CST 2009
Clone         Clone        Primary             Genbank   Level Phrap    Phrap  Phrap Phrap Consed_Err         Latest     Map        Organism       Major
                       Current/Original        Accession       Size     Ctgs   Fold  Base  Per 10KB           Submission
Type          Name        Researcher           Number          Hi       Hi(Lo) Cover Qual  Hi  ( Lo )   Reads Date       Location              Collaborator
======= ============= ======================== ========= ===== ======== ====== ===== ===== ============ ===== ========== ======== ============ =============
-       T12x1         -                               -     1        0  0 (0)                 -(    -)                - -                 -          -
BAC     hba-8l19      Ruihua Shi, Jing Yi      AC238499     3   134187  1 (1)   7.0  45.4  0.62( 8.78)  2682 2009-10-02 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-34p21     Ruihua Shi, Jing Yi      AC238507     2   109190  4 (4)  13.5  49.8  4.82(155.28)  5281 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-37d10     Ruihua Shi, Jing Yi      AC233131     3   125207  1 (1)  10.6  47.8   0.2(97.57) 10260 2009-10-27 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-55e23     Ruihua Shi, Jing Yi             -     1        0  0 (0)   2.8  22.5     -(    -)     5          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-57a1      Ruihua Shi, Jing Yi      AC233132     2   154749  1 (1)   5.8  40.7  4.89(133.41)  4212 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-57c1      Ruihua Shi, Jing Yi      AC233133     3   113672  1 (1)   8.5  46.2  0.26(50.07)  3510 2009-10-02 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-92h13     Ruihua Shi, Jing Yi      AC233135     2   125136  2 (2)   5.7  41.2  7.22(125.68)  3392 2009-10-29 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-101i8     Ruihua Shi, Jing Yi      AC233120     1        0  0 (0)   2.5  35.1     -(    -)   183 2008-11-19 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-162g22    Ruihua Shi, Jing Yi      AC233126     1    11482  4 (4)   2.5  31.3 803.91(791.68)   354 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-208m24    Ruihua Shi, Jing Yi             -     1        0  0 (0)   2.6  28.3     -(    -)    43          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-245n21    Ruihua Shi, Jing Yi      AC233128     1    32846 11 (12)   2.6  29.7 643.88(648.63)   420 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-309d12    Ruihua Shi, Jing Yi             -     1        0  0 (0)   2.5  22.3     -(    -)    33          - -        Solanum lycopersicum Giovannoni,J.
-       T12x2         -                               -     1        0  0 (0)                 -(    -)                - -                 -          -
BAC     hba-11e16     Ruihua Shi, Jing Yi      AC233121     2   146777  3 (3)   5.6  46.2  4.91(20.31)  1885 2009-11-21 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-12d17     Ruihua Shi, Jing Yi      AC233122     2   122957  1 (4)   5.3  34.8  5.31( 60.8)  2996 2009-11-20 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-13b20     Ruihua Shi, Jing Yi      AC233123     2   126464  1 (1)   7.0  41.7  1.25( 1.24)  5919 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-57g1      Ruihua Shi, Jing Yi      AC233134     1    28138  8 (9)   2.7  31.6 472.95(346.28)   351 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-102l15    R. Shi, J. Ying          AC238502     2   115108  2 (2)   8.7  46.7  3.14(184.06)  2201 2009-10-03 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-155i21    Ruihua Shi, Jing Yi      AC233124     1   131078 10 (9)   2.7  35.1 83.31(83.72)   355 2009-10-29 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-156c3     Ruihua Shi, Jing Yi      AC233125     3   129513  1 (1)   5.9  45.3  0.34( 0.36)  2787 2009-10-29 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-201c12    Ruihua Shi, Jing Yi      AC233127     1   304942 34 (31)   5.3  43.2 64.32(42.96)  3583 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-204i5     Ruihua Shi, Jing Yi             -     1        0  0 (0)   2.3  18.8     -(    -)    94          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-222h10    Ruihua Shi, Jing Yi      AC238498     1   150463  3 (3)   5.7  46.0  7.94( 4.29)  3292 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-248a13    Ruihua Shi, Jing Yi      AC233129     1    99169 26 (26)   2.8  27.8   389(402.47)   550 2009-10-03 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-256l16    Ruihua Shi, Jing Yi      AC233130     1   153394 10 (10)   3.9  40.5 94.66( 94.5)   985 2009-10-29 -        Solanum lycopersicum Giovannoni,J.
-       T12x3         -                               -     1        0  0 (0)                 -(    -)                - -                 -          -
BAC     hba-5l21      Ruihua Shi, Jing Yi, Lip AC238511     3   140843  1 (1)   4.0  44.1  1.77(29.03)    64 2009-11-21 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-10f3      Ruihua Shi, Jing Yi, Lip AC238503     2   154786  2 (3)  15.5  47.4  8.45(157.39) 10116 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-17l24     Ruihua Shi, Jing Yi, Lip AC238504     2   138094  3 (4)   8.4  45.1  70.4(82.71)  6083 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-17p20     Ruihua Shi, Jing Yi, Lip        -     1        0  0 (0)   0.0  16.5     -(    -)     2          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-23h4      Ruihua Shi, Jing Yi, Lip AC238505     2   102895  2 (2)   4.0  46.2  5.77( 8.78)    41 2009-11-21 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-24o6      Ruihua Shi, Jing Yi, Lip AC238506     3   104211  1 (1)  15.3  50.7  0.11( 0.11)  5869 2009-10-27 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-43d23     Ruihua Shi, Jing Yi, Lip AC238508     3   148085  1 (1)  15.4  46.1  0.26( 0.29)  9793 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-53j1      Ruihua Shi, Jing Yi, Lip AC238509     2   113552  2 (2)  10.6  46.0  0.29(31.67)  4366 2009-10-03 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-54n1      Ruihua Shi, Jing Yi, Lip        -     1        0  0 (0)   0.0  42.3     -(    -)     2          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-57j16     Ruihua Shi, Jing Yi, Lip AC238510     2   134243  2 (2)   8.6  50.4  0.18(16.51)  2657 2009-10-03 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-60a6      Ruihua Shi, Jing Yi, Lip        -     1        0  0 (0)   2.3  25.5     -(    -)   168          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-71f18     Ruihua Shi, Jing Yi, Lip AC238512     3   154120  1 (1)  14.2  48.7  0.32(24.37)  8288 2009-10-03 -        Solanum lycopersicum Giovannoni,J.
-       T12x4         -                               -     1        0  0 (0)                 -(    -)                - -                 -          -
BAC     hba-111d21    Chunmei Qu, Yanbo Xing   AC238905     2   122487  1 (1)   9.3  41.8  1.05(34.05)  5168 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-126f9     Chunmei Qu, Yanbo Xing   AC238908     1   122292  4 (4)   9.4  35.1  71.9(80.92)  5498 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-131f15    Chunmei Qu, Yanbo Xing   AC238909     2   105414  2 (2)   7.1  32.6 130.1(150.95)  3077 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-126h21    Chunmei Qu, Yanbo Xing          -     1        0  0 (0)   0.0  12.8     -(    -)     5          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-79n4      Chunmei Qu, Yanbo Xing   AC238928     3   121323  1 (1)   8.3  41.9 35.36(35.39)  4397 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-131o24    Chunmei Qu, Yanbo Xing   AC238910     3    99764  1 (1)   7.7  42.1 13.53(13.53)  3405 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-222e21    Chunmei Qu, Yanbo Xing   AC238920     1   124896  5 (4)   7.4  32.8 17.99(16.02)  3791 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-140o23    Chunmei Qu, Yanbo Xing   AC238911     2   126306  2 (2)   8.9  33.9 22.75(22.64)  4947 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-202l21    Chunmei Qu, Yanbo Xing          -     1        0  0 (0)                 -(    -)                - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-203e6     Chunmei Qu, Yanbo Xing   AC238915     3   117751  1 (1)   9.1  41.9 18.06(18.58)  4696 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-210f9     Chunmei Qu, Yanbo Xing   AC238918     1    34613 12 (13)   2.6  26.5 1099.23(1136.75)   574 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-164m23    Chunmei Qu, Yanbo Xing   AC238912     1   110041  3 (3)   7.6  40.9  9.87( 15.8)  3394 2009-11-20 -        Solanum lycopersicum Giovannoni,J.
-       T12x5         -                               -     1        0  0 (0)                 -(    -)                - -                 -          -
BAC     hba-237a2     Baifang Qin, Keqin Wang  AC238922     1   138343 18 (17)   3.0  33.0 128.89(136.42)   963 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-330o5     Baifang Qin, Keqin Wang  AC238926     2   131182  3 (3)   3.6  28.7 15.14(15.15)  1047 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-239e7     Baifang Qin, Keqin Wang  AC238923     1    53507  1 (1)  16.3  36.0  3.42( 8.27)  6033 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-37n23     Baifang Qin, Keqin Wang         -     1        0  0 (0)   0.0   1.8     -(    -)     2          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-21o12     Baifang Qin, Keqin Wang  AC238919     1   109476 11 (10)   2.9  29.8 225.62(258.33)   985 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-20a12     Baifang Qin, Keqin Wang  AC238917     2   134621  3 (4)   2.9  33.8 39.98(40.55)   852 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-188n9     Baifang Qin, Keqin Wang  AC238914     1    46939  2 (2)  19.4  41.9 77.03(77.03)  6701 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-206b16    Baifang Qin, Keqin Wang  AC238916     1   134734  5 (5)   7.4  35.7 14.92(16.98)  4125 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-286k14    Baifang Qin, Keqin Wang         -     1        0  0 (0)                 -(    -)                - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-291l11    Baifang Qin, Keqin Wang  AC238924     3    99980  1 (1)   8.2  41.9  0.69( 4.23)  3491 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-305j13    Baifang Qin, Keqin Wang         -     1        0  0 (0)   2.5   8.0     -(    -)    34          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-53l19     Baifang Qin, Keqin Wang  AC238927     1   135734  5 (5)   5.5  37.1 23.54(28.96)  2454 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
-       T12x6         -                               -     1        0  0 (0)                 -(    -)                - -                 -          -
BAC     hba-96n15     Ruihua Shi, Liping Zhou  AC238929     1    47618 14 (15)   2.9  33.5 422.85(395.51)   772 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-169h23    Ruihua Shi, Liping Zhou  AC238913     1    95027 15 (14)   3.6  39.0 231.96(212.8)   791 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-234c10    Ruihua Shi, Liping Zhou  AC238921     1   121251 9 (10)   4.8  41.4 31.75(55.48)   931 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-102n10    Ruihua Shi, Liping Zhou         -     1        0  0 (0)   0.0  12.8     -(    -)     2          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-123a7     Ruihua Shi, Liping Zhou  AC238906     1    62010  5 (4)   4.2  39.0  47.7( 47.1)   472 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-1h15      Ruihua Shi, Liping Zhou  AC238948     1    82805 21 (21)   2.8  27.6 431.36(472.84)   712 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-156i17    Ruihua Shi, Liping Zhou         -     1        0  0 (0)   2.0  15.5     -(    -)    15          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-124n23    Ruihua Shi, Liping Zhou  AC238907     1    80263  7 (7)   4.0  38.2 216.12(215.87)   535 2009-11-18 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-240p19    Ruihua Shi, Liping Zhou         -     1        0  0 (0)   0.0   1.9     -(    -)     2          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-305f14    Ruihua Shi, Liping Zhou  AC238949     1    82312 19 (19)   3.1  32.9 283.44(275.26)   652 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
BAC     hba-238g16    Ruihua Shi, Liping Zhou         -     1        0  0 (0)   0.0  12.9     -(    -)     2          - -        Solanum lycopersicum Giovannoni,J.
BAC     hba-306e10    Ruihua Shi, Liping Zhou  AC238925     1   140446 10 (9)   3.8  41.7 22.34(19.49)  1287 2009-11-10 -        Solanum lycopersicum Giovannoni,J.
 
phase1=2633819 phase2=2163961 phase3=1488656 total=6286436


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Bruce Roe, broe@ou.edu